Pairwise Alignments

Query, 1016 a.a., formate dehydrogenase-O, large subunit (NCBI) from Escherichia coli BW25113

Subject, 999 a.a., formate dehydrogenase from Ralstonia solanacearum GMI1000

 Score =  239 bits (611), Expect = 5e-67
 Identities = 220/719 (30%), Positives = 316/719 (43%), Gaps = 149/719 (20%)

Query: 3   VSRRQFFKICAGGM-AGTTAAALGFAPSVAL------AETRQYKLLRTRETRNTCTYCSV 55
           + RR F K    G+ AG  A+ L       +      AE +   ++R    R  C++CSV
Sbjct: 40  MDRRTFLKRSGIGVGAGLAASQLSLVKKATVVGEARAAEGKDDIVVR----RTVCSHCSV 95

Query: 56  GCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRA 115
           GC +    + +G    +  +F      D P+N GA C KGA L +  H E RLK P    
Sbjct: 96  GCAVDAV-VQNGVWVRQEPVF------DSPINMGAHCAKGAALREHGHGEYRLKTPMKLV 148

Query: 116 PGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGY 175
            G  ++Q+ISWE+A + I   M   R         +    + +   G   +S  SNE  Y
Sbjct: 149 DG--RYQRISWEQALNEIVARMNAIR---------QETGPDSFFFVG---SSKHSNEQSY 194

Query: 176 LTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAE 235
           L +K+    G    D+QAR+ H  TVA +A T+G GAMTN + D++NA   + +G NAAE
Sbjct: 195 LLRKWVSFFGTNNCDHQARICHSTTVAGVANTWGYGAMTNSYNDMQNAKCALYIGSNAAE 254

Query: 236 AHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNE 295
           AHPV     + AK   G K+IV+DPR+TRTAA +D Y  IRSGTDIAFL GVL ++  N 
Sbjct: 255 AHPVSMLHLLHAK-ETGCKVIVVDPRYTRTAAKSDEYVRIRSGTDIAFLFGVLHHVFKN- 312

Query: 296 KFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQ 355
                                G+ED  F         +D+    Y +D+     RD  L 
Sbjct: 313 ---------------------GWEDRQFI--------HDR---VYGMDK----VRDEVL- 335

Query: 356 HPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQH 415
                        +++TPD VE +CG P+    KV    AE  A ++ ++ ++ +G TQH
Sbjct: 336 -------------AKWTPDKVEAVCGVPEAQVRKV----AEMMAMNRPSTLVWCMGQTQH 378

Query: 416 SVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQ 475
           ++G   +R   ++QL LGN+G  GGG N  RGH N+QG TD+G    SLPGY  L +   
Sbjct: 379 TIGNAIVRASCIVQLALGNIGRPGGGANIFRGHDNVQGATDVGPNPDSLPGYYGLAA--- 435

Query: 476 TDLQTYLTANTPKPLLEGQVNYWGNYPKFF---VSMMKAFFGDKATAENSWGFDWLPKWD 532
                                 W +Y   +      +K  F  +A  E S          
Sbjct: 436 --------------------GAWKHYAAVWGVDYDWIKGRFASQAMMEKS---------- 465

Query: 533 KGYDVLQYFEMMKEGKVNGYICQGFNPVASF-----PNKN----KVIGCLSKLKFLVTID 583
            G  V ++ + + E   N  I Q  N  A F     PN      ++   L KL  LV ID
Sbjct: 466 -GTTVSRWIDAVLE--KNELIDQDHNVRAMFYWGHAPNSQTRGLEMKRALDKLDLLVVID 522

Query: 584 PLNTETSNFWQNHGELNEVDSS--KIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGAD 641
           P  + T+        +   D +       V+ LP+    E +GS   S R LQW  K  +
Sbjct: 523 PYPSATAAM----ANMPAADGTPPNPNRAVYLLPAATQFETSGSCTASNRSLQWREKVIE 578

Query: 642 APGIALTDGEILSGIFLRL--RKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESN 698
               +  D  I+  +  RL      +++      +   MTW      EP +E +  E N
Sbjct: 579 PLFESQPDHVIMQALADRLGFGNELSKRLKVTEYKRAGMTW-----REPGTESILREIN 632



 Score = 41.2 bits (95), Expect = 4e-07
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 25/146 (17%)

Query: 887  DKFPYVGTTYRLTEHFHYW--TKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSN 944
            +KFP + T+ RL E+      T+     A LQ E FVEI    A   GI   D V V + 
Sbjct: 860  EKFPIILTSGRLVEYEGGGEETRSNPWLAELQQENFVEINPKAAADRGIRNNDYVWVKTP 919

Query: 945  RG-YIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAK--------------KGFIA 989
             G  IK +A+VT+R+         +D   IP H+      K              +G   
Sbjct: 920  TGAQIKVRALVTERV--------GVDHAFIPFHFSGWWQGKDLLDYYPEGAHPIVRGEAV 971

Query: 990  NTLTPFVGDANTQTPEFKSFLVNVEK 1015
            NT T +  D+ T   E K+ +  +E+
Sbjct: 972  NTATTYGYDSVTMMQETKTTVCQIER 997