Pairwise Alignments

Query, 162 a.a., transcriptional activator RfaH (NCBI) from Escherichia coli BW25113

Subject, 167 a.a., antitermination protein NusG from Pedobacter sp. GW460-11-11-14-LB5

 Score = 58.2 bits (139), Expect = 7e-14
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 4   WYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEV 63
           WY +Y +    ++A E L R+ +    P+    K    ++  V EPL  +YLF       
Sbjct: 8   WYPVYTRSRAEKKANEELNRKGIQTYLPLKKAVKQWSDRKKIVEEPLIKSYLFAYISAR- 66

Query: 64  IHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPY---PGDKVIITE 120
                +  T GV+ F+ F +  A +P   IH L +    D       Y   PG++V+I  
Sbjct: 67  -EYAEVLMTNGVARFIYFSSQIASIPDQQIHDLKLLLATDADLELIDYDIKPGERVLIKA 125

Query: 121 GAFEGFQAIFTEPDGEARSMLLL 143
           G F+G  A       + R +L L
Sbjct: 126 GPFKGVIAELVSVHNKQRIILRL 148