Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho (NCBI) from Escherichia coli BW25113

Subject, 621 a.a., Transcription termination factor Rho from Xanthomonas campestris pv. campestris strain 8004

 Score =  600 bits (1546), Expect = e-176
 Identities = 295/418 (70%), Positives = 359/418 (85%), Gaps = 1/418 (0%)

Query: 2   NLTELKNTPVSELITLGENMGL-ENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60
           +L++LK  P  +L+ + + + + E +AR RKQD+IFA+LK   + GE +  DGVLEIL D
Sbjct: 204 SLSDLKRMPAQKLLDIADQLNIQEGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPD 263

Query: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120
           GFGFLR+A++SYLAGPDD Y+SPSQIRRFNLRTGD +SG+IR PK+GERYFAL  V+ +N
Sbjct: 264 GFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFALSIVDTIN 323

Query: 121 FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180
            +  E ++NK+LFENLTPL    R R+ERG+GSTED+T R+LDL +P G+GQR LIV+PP
Sbjct: 324 GEPLEASKNKVLFENLTPLFPRRRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPP 383

Query: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240
           KAGKTM++Q +A +I  NHP+  ++VLLIDERPEEVTEMQR V+GEV++STFDEPA+RHV
Sbjct: 384 KAGKTMMMQQVATAITTNHPEVHMIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARHV 443

Query: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300
           QVAEMVIE+AKRLVEHKKDV+ILLDSITRLARAYN VVP+SGKVLTGGVDANALHRPKRF
Sbjct: 444 QVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRF 503

Query: 301 FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY 360
           FGAARNVEEGGSLTIIATAL++TGSKMDEVIYEEFKGTGN E+HL+R+I EKRV+PAID 
Sbjct: 504 FGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDI 563

Query: 361 NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKR 418
           NRSGTR+E+LL   E LQK+WILRK++HPM EI AMEFL++K+  TK+ND+FF  MKR
Sbjct: 564 NRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKTTKSNDEFFSSMKR 621