Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 540 a.a., RNA helicase from Ralstonia solanacearum GMI1000

 Score =  273 bits (698), Expect = 9e-78
 Identities = 172/437 (39%), Positives = 232/437 (53%), Gaps = 35/437 (8%)

Query: 11  FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70
           FS+  L  K+V A+ + G+   TPIQ  A+P  L G D+   AQTGTGKT  F     H 
Sbjct: 3   FSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLHR 62

Query: 71  LLSHPAIADRKVNQP-------RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123
           L    A+   KV  P       RAL++ PTRELA Q+        +   LK  + +GG G
Sbjct: 63  L---SAVQPNKVQTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVG 119

Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183
            + Q+  L+ GVDI++ T GRL+D+  Q  I+L  I+++VLDEADRM D+GFI DIR + 
Sbjct: 120 INPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKIL 179

Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243
             +PP  Q  N+LFSAT S  +R LA   ++    IEV     T   +++ ++    E K
Sbjct: 180 NILPPKRQ--NLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERK 237

Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303
             LL  L+ +    + ++F  TKH    +   L  DG     + G+ +Q  R R L EF 
Sbjct: 238 RELLAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFK 297

Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363
            G L +LVATD+AARG+ I  + HV N+DLP+  EDYVHRIGRTGRAGA G +ISL C +
Sbjct: 298 AGTLRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVD 357

Query: 364 YALNLPAIETYIGHSIP---VSKYNPDALMTDLPKPLRLTR-----PRTGNG-------- 407
               L  IE  I   +P   ++ + PD   T  P+P+   R     PR G G        
Sbjct: 358 EHGLLRDIERLIKRELPRTVLAGFEPDP--TIAPEPIPNGRNSARAPRQGGGRSQPPRQA 415

Query: 408 -----PRRTGAPRNRRR 419
                PR   APR  RR
Sbjct: 416 AGNAAPREPRAPREPRR 432