Pairwise Alignments

Query, 475 a.a., predicted multidrug or homocysteine efflux system (NCBI) from Escherichia coli BW25113

Subject, 472 a.a., multidrug transporter subunit MdtD from Ralstonia sp. UNC404CL21Col

 Score =  373 bits (958), Expect = e-108
 Identities = 199/463 (42%), Positives = 287/463 (61%), Gaps = 17/463 (3%)

Query: 8   SMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPVSG 67
           S   + WI    FFMQALD TI+NTALP++A SL   PL ++S +++YTLT+AML P SG
Sbjct: 14  SQNAMLWIVFAGFFMQALDTTIVNTALPSMARSLGEKPLDLKSVVVAYTLTMAMLTPASG 73

Query: 68  WLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALLRA 127
           WLAD+FGTRR++  A+ +F LGS+ CA +++LPQLV+ RV+QGIGG+M++P+ RLA+LR 
Sbjct: 74  WLADKFGTRRVYFTAILIFVLGSVFCATAHTLPQLVIARVLQGIGGSMLLPIGRLAVLRN 133

Query: 128 YPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLLYARKHMP 187
            P  + +  L FV++ G VGP+LGP LGG LV   +WHWIFLIN+P+G  GL   R+++P
Sbjct: 134 IPGEQYIAALAFVSVAGQVGPLLGPALGGWLVQDVSWHWIFLINVPVGFVGLFAVRRYLP 193

Query: 188 -NFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLLLYILHA 246
            +   A   FD  G  L  L +V FS  +E   +   + W A+ +I  S+   LLYI HA
Sbjct: 194 HDAVRAVAPFDWLGCGLLSLCMVAFSLALENGAQ---SPWSAV-LIAVSVVSALLYIPHA 249

Query: 247 RRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIAGCMMAP 306
           +R   PL  L LF+   FS+G+VGN+  R+G+G VPFL+PL+ Q+  GY    +G ++ P
Sbjct: 250 KRRAAPLFQLALFREPNFSVGLVGNLFCRIGSGAVPFLLPLLFQLQLGYSPLHSGLLLLP 309

Query: 307 TALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILPLFILGM 366
            A+  ++AK  V  ++ R GY   L   T ++G+ IA F+  SP   + + I+ L + G 
Sbjct: 310 IAIAGMLAKRWVVPLVNRFGYDVFLQVNTWVVGISIASFAAMSPGWPLALSIVQLSVFGW 369

Query: 367 AMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTV 426
           A S QF AMN+ITL  L+  +A SGNS+ ++ Q L+I LGV++   ++ ++    G    
Sbjct: 370 ANSMQFAAMNSITLKGLSHQDAGSGNSLFSMVQMLAIGLGVSIGGGLVSLFSVKLG-VAA 428

Query: 427 EQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNR 469
             +   F TMG++T  SA +F            K   KSKP R
Sbjct: 429 PAYRLAFFTMGVVTAFSALIFR-----------KLDAKSKPAR 460