Pairwise Alignments

Query, 389 a.a., predicted xylanase (RefSeq) from Escherichia coli BW25113

Subject, 288 a.a., endo-1,4-beta-xylanase Z precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 56/167 (33%), Positives = 76/167 (45%), Gaps = 28/167 (16%)

Query: 147 TYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAE 206
           T  S  L  ER   ++ P GY       PVLY  HG GD     +  G++  I D  +AE
Sbjct: 30  TVKSKILGMERSYSIYLPAGYDEGDGSYPVLYLLHGLGDNHTGWVQFGQVQYIADKAIAE 89

Query: 207 GKIKPMLVVIPDTETDAKGIIP--------EDFVPQERRKVFYPLNAKAADRELMNDIIP 258
           GK  PM++V+PD +T  KG           EDF  QE                    +IP
Sbjct: 90  GKSAPMIIVMPDADTVHKGYFNLLDGTYNYEDFFFQE--------------------LIP 129

Query: 259 LISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGV 305
            I K + VR ++  RA++GLS GG  AL   +++ E F  +A  S V
Sbjct: 130 HIEKTYRVRAESRYRAISGLSMGGGGALFYALHYPEMFVAVAPLSAV 176