Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (338), Expect = 4e-36
 Identities = 105/391 (26%), Positives = 184/391 (47%), Gaps = 17/391 (4%)

Query: 5   LICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADR 64
           ++ +  ++     G+ +YL  LP I+ DL   +A   +  +++L G   + LF G ++D 
Sbjct: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73

Query: 65  SGRKPVAIPGAALFIIASVFCSLAETSTLFLA-GRFLQGLGAGCCYVVAFAILRDTLDDR 123
            GR+P  + G  ++++ +V C +       L  GR LQGLGAG   V+  ++LRD+ D  
Sbjct: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133

Query: 124 RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKETRP 183
              K LS L+    I+P++APVLG  +     WQS+F  + +   A+  L L IL ET P
Sbjct: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLP 193

Query: 184 AAPAASDKPR----ENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGE 239
             P    + R      ++ L N+   S      LS    L  ++  P LL + +G    +
Sbjct: 194 -YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAAD 252

Query: 240 YATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSL-FGI 298
           Y + + + +   +  S         F  R L+  +  L + AG+ L ++     +L +  
Sbjct: 253 YGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSVFNLIWAF 312

Query: 299 TLICAGFSVGFGVAMSQALGPFSLRAGVASS-----TLGIAQVCGSSL-WIWLAAVVGIG 352
           T +     + F +A +  L P   +AG  S+      +GIA + G  L   W+ +   +G
Sbjct: 313 TWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTSQNAMG 372

Query: 353 AWNMLIGILIACSIVSLLLIMFVAPGRPVAA 383
            + +L+GI    +++S+L+    A  +P AA
Sbjct: 373 VFYILVGI----TMLSVLIATKKAHSQPSAA 399