Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (411), Expect = 1e-44
 Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 11  LVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPV 70
           LVL  P  ID+YL  LP+I+   +   A      + +L  M    LFAG +AD+ GR+ V
Sbjct: 20  LVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGRRTV 79

Query: 71  AIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLS 130
           A+ G +++ ++++    A++    L  R LQGLGA    V AFA +RD    +R  K++S
Sbjct: 80  ALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGKMIS 139

Query: 131 LLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKETRP--AAPAA 188
            LNG  C IP LAP+LG  +  +F W++ F  M    + V +     L+E+ P   +  A
Sbjct: 140 YLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGSRPA 199

Query: 189 SDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTA 248
             K    +  L    FL    +  L+++VIL +V ++PV+LME +     E+     + A
Sbjct: 200 VFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWFGVNA 259

Query: 249 GVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSL---FGITLICAGF 305
            +++    + P  +     R  +I      + AG  + V  + A +L     + L   GF
Sbjct: 260 VINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFMLPVFLSSIGF 319

Query: 306 SVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGILIACS 365
           +   G A  +AL PF  +AG A++ LG+ Q+ GS L +     + +    +LIG+ +  +
Sbjct: 320 AWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRI-MPEPQLLIGLTMWLA 378

Query: 366 IVSLLLI 372
             +LL++
Sbjct: 379 APALLIL 385