Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 428 a.a., multidrug effflux MFS transporter from Rhodopseudomonas palustris CGA009

 Score =  125 bits (314), Expect = 2e-33
 Identities = 110/394 (27%), Positives = 177/394 (44%), Gaps = 33/394 (8%)

Query: 16  PAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPVAIPGA 75
           P  + +++  LP +A+D  +  +   +  S+Y+ G+A + L  G ++DR GR+PV + G 
Sbjct: 36  PIALYIFVPALPVLASDFGSDISVAQMTVSLYMVGLACSQLIMGPLSDRFGRRPVLLGGL 95

Query: 76  ALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGI 135
           AL + AS+ C  A+T    +A RFLQ LG     V++ AI+RD     R   +LSL+  +
Sbjct: 96  ALMVAASIGCIFAQTLPQLIALRFLQALGGASGMVISRAIIRDLYSRDRVGGMLSLVIAV 155

Query: 136 TCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKET-RPAAPAASDKPRE 194
             I  +L+P+ G +I   F W+++F+A+    I V       L ET R + PAA      
Sbjct: 156 MMIAQMLSPLAGGVIETAFGWRAIFYAVTAGAIVVAAAITLALPETSRRSTPAAQRGGFG 215

Query: 195 NSESLL--NRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTA---- 248
                L  +R F+  V+   L+ ++I  F    P +++  MG    EY    A +     
Sbjct: 216 TDLRSLFGSRAFIGYVLCQVLASAIIFIFAGGGPYVVVTQMGRSSAEYGAWFASSGFAYL 275

Query: 249 -GVSMTVSFSTPFALG--IFKPRTLMITSQVLFLAAGI------TLAVSPSHAVSLFGIT 299
            G    V FS   +L   I+    L I   +L LA GI         +  +H + +FG  
Sbjct: 276 MGNVFCVKFSPRHSLDRLIWFGLGLQIAGALLNLAWGILGWNQVPSWLFGTHMIIMFGNA 335

Query: 300 LICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSL------WIWLAAVVGIGA 353
            + A  + G      QA       AG AS  +G  Q    SL      W+       +  
Sbjct: 336 AVMANAAAGAISIRPQA-------AGTASGLMGFTQFGFGSLCSQAGAWLGGHFATPLPL 388

Query: 354 WNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEI 387
              + G  +AC+      ++F+ P R + A EE+
Sbjct: 389 NIAIFGTALACASA----MIFLVPRRNLIATEEL 418