Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 406 a.a., drug resistance transporter, Bcr/CflA subfamily from Marinobacter adhaerens HP15

 Score =  146 bits (368), Expect = 1e-39
 Identities = 112/393 (28%), Positives = 185/393 (47%), Gaps = 25/393 (6%)

Query: 10  ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKP 69
           A V L P   DMYL  LP+I +D      Q+ +  S+Y+ G A A L  G +ADR GRKP
Sbjct: 15  AAVALGPLATDMYLPALPQIGSDFGTGTDQVQLTLSLYMVGFAIAQLICGPLADRFGRKP 74

Query: 70  VAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVL 129
           + I G  LF IAS+ C+LA      +  RFLQ LG     V+  A +RD    R  AK+L
Sbjct: 75  IMIGGFVLFAIASIGCALATNIETLILCRFLQALGGSAGPVLGRAAIRDIYTPREAAKIL 134

Query: 130 SLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKETRPAAPAAS 189
           ++L  I  + P +AP +G L+     W S+F  +A+ G A++M  +       P  P   
Sbjct: 135 AILASIMALAPAVAPTIGGLLTANLGWSSVF--IALGGYALVMAVVVAFGIPEPMRP--- 189

Query: 190 DKPRENSE--SLLNRF--------FLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGE 239
            + R++ +  SLL  +        F+   +   L  S +  F++ S  +L++ +G    +
Sbjct: 190 -EHRQSLKICSLLRNYRTIAKDISFVGYTLTNALIFSGLFAFLSGSSFVLIDFLGVPTEQ 248

Query: 240 YATIMA-LTAGVSMTVSFSTPFALG-IFKPRTLMITSQVLFLAAGITLAV-SPSHAVSLF 296
           +    A + AG    V   T   LG    P  +++   ++ +  G  +AV + S   +++
Sbjct: 249 FGLYFACMVAG--YIVGNLTAVRLGRRLLPDQILVRGLIIAVGGGSLMAVLALSEVFNVW 306

Query: 297 GITLICAGFSVGFGVAMSQ----ALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIG 352
            + L  A F +G G+ + Q    AL  F   AG AS+  G  Q+  +++   L   +  G
Sbjct: 307 AVILPQALFMIGTGMVLPQTMAGALANFPTMAGSASALFGFTQMAVAAIAGMLVGHLHDG 366

Query: 353 AWNMLIGILIACSIVSLLLIMFVAPGRPVAAHE 385
              ++  I+ AC+ +++   + +    P    E
Sbjct: 367 TSLVMASIIAACAAIAMGCYLLLVQRYPAKGFE 399