Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 556 a.a., Preprotein translocase subunit YidC from Pseudomonas stutzeri RCH2

 Score =  480 bits (1235), Expect = e-140
 Identities = 256/559 (45%), Positives = 362/559 (64%), Gaps = 32/559 (5%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQT-----------TTTAAGSAAD 49
           MD +R++L++AL  V++++   W QD        +T Q+           + T+ G+A D
Sbjct: 1   MDIKRSILLVALAVVAYLMVLQWNQDYGQAALPAETAQSQPGVPTLPDSPSATSEGNADD 60

Query: 50  ----------QGVPASG-QGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PF 97
                       +PA+    +LI V+TDVLD+ I+ RGGD+ +  LP +P+  +    PF
Sbjct: 61  VPAVAGQQQASALPATAPSSQLIRVRTDVLDVAIDPRGGDIVELHLPQFPRRQDRPDVPF 120

Query: 98  QLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAA 157
           QL E S +  Y+AQSGL G DGPD  +   RP Y+ EK  Y LAEGQ++L V + Y+ A 
Sbjct: 121 QLFERSGERTYEAQSGLIG-DGPDQASG--RPQYSSEKTEYQLAEGQDQLVVDLNYS-AD 176

Query: 158 GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHT 217
           G  + K F L+RG+YA+ VNY + N  E+P     FGQLK+  +  P   T +      T
Sbjct: 177 GVNYIKRFTLERGNYALKVNYLIDNQSEQPWTGYLFGQLKRDKSGDPSSSTATGTA---T 233

Query: 218 FRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTA 277
           + GAA  T DE Y K     + D++NL  + +GGW+A LQ YF TAWIP  + TN   T 
Sbjct: 234 YLGAALWTKDEPYRKVSMGDM-DDKNLRETVQGGWIAWLQHYFVTAWIPQAEDTNQVQTR 292

Query: 278 NLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFIS 337
               G   IG+    V V  G  G   +TL+ GP+ QDK+  ++P L LTVDYG LWFI+
Sbjct: 293 KDSQGNYIIGFTGPAVTVAAGAQGETGATLYAGPKSQDKLEELSPGLRLTVDYGILWFIA 352

Query: 338 QPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERL 397
           QP+F LL+ IH+ +GNWG+SII++T I++   +PL+ A Y SMA+MR + PK+QA++E+ 
Sbjct: 353 QPIFWLLENIHALLGNWGWSIIVLTIIIKLAFFPLSAASYRSMARMRAVSPKMQALKEQF 412

Query: 398 GDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHD 457
           GDD+Q++SQ MM LYK EK+NPLGGC P+L+QMP+FLALY++L+ SVE+RQAP+  WI D
Sbjct: 413 GDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWITD 472

Query: 458 LSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYY 517
           LS +DP++ILPI+MGVTMF  Q+++PT   DPMQ ++M  +P+IFT FFLWFP+GLVLY+
Sbjct: 473 LSIKDPFFILPIIMGVTMFIQQQLNPTP-PDPMQARVMKLLPIIFTFFFLWFPAGLVLYW 531

Query: 518 IVSNLVTIIQQQLIYRGLE 536
           +V+N+++I QQ  I R +E
Sbjct: 532 VVNNVLSIAQQWYITRQIE 550