Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 573 a.a., Inner membrane protein translocase component YidC, long form from Xanthomonas campestris pv. campestris strain 8004

 Score =  340 bits (873), Expect = 7e-98
 Identities = 213/571 (37%), Positives = 305/571 (53%), Gaps = 42/571 (7%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQ--------------------------PQAQ 34
           M+  R  L+ A L V+ ++W  W +DK P                           P AQ
Sbjct: 1   MNQTRVFLIFAWLMVAALLWMEWGKDKAPANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60

Query: 35  QTTQTTTTAA--GSAADQGVPAS-GQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKEL 91
              Q  + AA   ++     PA+ G    I++ +DVL L ++  G  V  A L  +P+  
Sbjct: 61  AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118

Query: 92  NSTQPFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPM 151
           + T+P +LL       Y A SG      P     G R         + LA+GQN L VP 
Sbjct: 119 DGTEPVKLLTEDAAHPYNATSGWASERSPVPGVGGFRA--EQPGTTFELAKGQNTLVVPF 176

Query: 152 TYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSS 211
            +    G +  + F L+RG YA+++   V N  +       F +L +   +P  L  G +
Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSR---VPTILSRGMT 233

Query: 212 NFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGT 271
           N    +F GA + +P E YE+  F    D+  LN    GGWVA+LQ +F TAWIP  D  
Sbjct: 234 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQA 293

Query: 272 NNFYTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-APHLDLTVDY 330
           + +  A  G    A   +     V PGQ+ +  + LWVGP++   +A      LD  VDY
Sbjct: 294 SLYVLAQDGPRDVA-ELRGPAFTVAPGQSASTEARLWVGPKLVSLLAKEDVKGLDRVVDY 352

Query: 331 GW---LWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQ 387
                +  I Q LF +L  +HSF+ NWG++II +  ++R  +YPL+ AQY S AKMR  Q
Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412

Query: 388 PKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELR 447
           P++  ++ER GDD+Q+  Q  M L+K EK+NP+GGC PLLIQMPIF ALY++L+ SVELR
Sbjct: 413 PRLAQLKERYGDDRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELR 472

Query: 448 QAPFALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFL 507
           QAP+  WI DL+A+DPY+ILP+L    M+  QK++PT   DPMQ K+M FMP++F V   
Sbjct: 473 QAPWLGWIQDLTARDPYFILPVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMA 532

Query: 508 WFPSGLVLYYIVS-NLVTIIQQQLIYRGLEK 537
           + P+GLVLY++V+  L  +IQ  +I +  EK
Sbjct: 533 FMPAGLVLYWVVNGGLGLLIQWWMIRQHGEK 563