Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

 Score =  614 bits (1583), Expect = e-180
 Identities = 320/553 (57%), Positives = 402/553 (72%), Gaps = 22/553 (3%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTA-AGSAADQGVPASGQG- 58
           MDSQRN+L+IAL  VSF+++Q W+  KNP PQA Q  Q+T  A A S +D+  P   Q  
Sbjct: 1   MDSQRNILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQNV 60

Query: 59  ----KLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGL 114
               K I+V TDVL L+I+T GGDV  A L  Y +ELNS + F LL+ +    + AQSGL
Sbjct: 61  AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGHQFIAQSGL 120

Query: 115 TGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAV 174
            G  G D  +N  RP Y V  D++ LAEGQ+EL++PMTY  A G  +TKTF+LKRG YAV
Sbjct: 121 VGPQGIDVTSNN-RPAYQVSADSFTLAEGQDELRIPMTY-QANGIDYTKTFILKRGSYAV 178

Query: 175 NVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYK 234
           +V ++V N       +  +  L+Q++     LD+G  N A+ T+RG AYST D +Y+KY 
Sbjct: 179 DVVFDVANNSGSEATLGMYAHLRQNL-----LDSGG-NLAMPTYRGGAYSTSDVRYKKYS 232

Query: 235 FDTIADNENLNISSKG----GWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKS 290
           FD + D    N+S+       WVAM+Q YFA+AWIP ++     Y+  + N +  +G ++
Sbjct: 233 FDDMKDR---NLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINN-LGDMGIRT 288

Query: 291 QPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSF 350
               +  G      +TLWVGP++QD+MAA AP+LDL VDYGWLWFI++PL  LL  I +F
Sbjct: 289 PNKTIANGDKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTF 348

Query: 351 VGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMA 410
           VGNWG +II +TFIVRG MYPLTKAQYTSMAKMRMLQPK+QAMRER+GDD+QR+SQEMM 
Sbjct: 349 VGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMME 408

Query: 411 LYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPIL 470
           LYK EKVNPLGGC P+L+QMPIF+ALY+ LM SVELR +PF  WIHDLSAQDPYYILP+L
Sbjct: 409 LYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLL 468

Query: 471 MGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQL 530
           MG +MF IQKMSPTT+TDPMQQKIMTFMPV+FT FFLWFPSGLVLY++VSN+VT+IQQ L
Sbjct: 469 MGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTL 528

Query: 531 IYRGLEKRGLHSR 543
           IY+ LEK+GLHS+
Sbjct: 529 IYKALEKKGLHSK 541