Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 595 a.a., 60 kDa inner membrane insertion protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  228 bits (581), Expect = 5e-64
 Identities = 153/523 (29%), Positives = 261/523 (49%), Gaps = 47/523 (8%)

Query: 41  TTAAGSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL 100
           T  A S + +   A+     I + T  L  +I  RG  ++   L  Y + ++   P   L
Sbjct: 84  TPGAASLSREEALAADISPRIGIDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISL 143

Query: 101 ETSP--QFIYQAQSG-LTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAA 157
            + P     Y A+ G + G  G   P      L+  ++ A  +     +  V +T+ +  
Sbjct: 144 LSPPGAPLPYYAEFGWVAGTPGVKVP--DADTLWQADRGALGV-----DAPVTLTWDNGE 196

Query: 158 GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHT 217
           G  F +   +   D+  ++   V+N G   + +  +G L   I  P  L+     + LH 
Sbjct: 197 GLRFIRKIAIDH-DFMFSITQAVENTGAGAVTLFPYG-LVSRINTPALLNY----YILHE 250

Query: 218 FRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDG--TNNF- 274
                +   D   ++ K+  + D+  +  +S GGW+ +  +Y+ TA +       T  F 
Sbjct: 251 GPLGVF---DGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSMPVTGRFL 307

Query: 275 YTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHL-----DLTVD 329
           Y    G       +      V+PG     ++ L+ G +    +      L     DL +D
Sbjct: 308 YQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIKNFDLAID 367

Query: 330 YGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPK 389
           +GW +F+++P F  ++++H  +GN G +I+  T +++ + +PL    Y SM+KM++LQP+
Sbjct: 368 FGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSMSKMKLLQPE 427

Query: 390 IQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQA 449
           ++ ++ER  DD+ R++QEMM+LYK E+VNPL GC P++IQ+P+F ALY +L  S+E+R  
Sbjct: 428 LKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFVSIEMRHE 487

Query: 450 PFALWIHDLSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPM 490
           PF  WI DL+A DP  +                    P++MGVTM+  QK++PT   DP 
Sbjct: 488 PFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNPTP-ADPT 546

Query: 491 QQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533
           Q KIM F+P++FT     F +GLV+Y+  +NL++I QQ +I +
Sbjct: 547 QAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMK 589