Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 622 a.a., membrane protein insertase YidC from Rhodopseudomonas palustris CGA009

 Score =  232 bits (591), Expect = 4e-65
 Identities = 172/608 (28%), Positives = 278/608 (45%), Gaps = 91/608 (14%)

Query: 2   DSQRNLLVIALLFVSFMIWQ------------AWEQDKNPQPQAQQTTQTTTTAAGSAAD 49
           D++  +L + L  +  + WQ            A +Q +    + Q  TQT   A+ +AA 
Sbjct: 3   DNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAAAP 62

Query: 50  QG------VPASGQ----------------GKLISVKTDVLDLTINTRGGDVEQALLPAY 87
                    PAS Q                G  I V+T  L  +I  +G  ++   L  Y
Sbjct: 63  AAPGAPGSAPASPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALMQY 122

Query: 88  PKELN-STQPFQLLETSPQFI-YQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQN 145
            + ++  + P +L   S     Y A+ G  G  G          L+  E    +      
Sbjct: 123 RETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPANP- 181

Query: 146 ELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPH 205
              V + + +  G TF +   +    Y   V  +V N G  P+ +  F  + +  T  PH
Sbjct: 182 ---VTLKWDNGEGLTFRRQITVD-DRYLFTVKDDVTNTGGAPVTLYPFALISRHGT--PH 235

Query: 206 LDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWI 265
           ++     + LH   G      D+  ++Y +  I + +++   +  GW+ +  +Y+A+A +
Sbjct: 236 VE---GYYILH--EGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALL 290

Query: 266 PHNDGT--NNFYTANLGNGIA-AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAP 322
           P         F    +GN       Y      V  G T   N+ L+ G +    +    P
Sbjct: 291 PDTSAQLQARFSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFP 350

Query: 323 --------------HLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGI 368
                         H DL +D+GW +FI++P+F  L +    VGN+G +I+++T +V+ +
Sbjct: 351 FAGLGGYDRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLL 410

Query: 369 MYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLI 428
             PL    Y SMAKM+ +QP++ A++ER  DDK +  QEMM +Y+ EK+NP+ GC P+L+
Sbjct: 411 FLPLANKSYASMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILL 470

Query: 429 QMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDP----------------------YYI 466
           Q+P+F +LY +L  ++E+R APF  WIHDLSA DP                      Y +
Sbjct: 471 QIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLV 530

Query: 467 L---PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLV 523
           L   P++MG TM+F  K++P    DP QQ I  +MPVIFT     FP+GLV+Y+  +N +
Sbjct: 531 LGAWPLVMGFTMWFQMKLNPQP-PDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTL 589

Query: 524 TIIQQQLI 531
           ++ QQ  I
Sbjct: 590 SVAQQAFI 597