Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 571 a.a., inner membrane protein translocase component YidC from Marinobacter adhaerens HP15

 Score =  458 bits (1179), Expect = e-133
 Identities = 241/569 (42%), Positives = 347/569 (60%), Gaps = 39/569 (6%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQT--TQTTTTAAG------------- 45
           MD QR +L   L  VS+++  AW +D +  P+  Q   +Q + TA               
Sbjct: 1   MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPPETAQVAESQPSQTAGNMGNSDNMVLPEDS 60

Query: 46  SAADQG-----VPASGQG-------------KLISVKTDVLDLTINTRGGDVEQALLPAY 87
           SA   G      P +GQ              + I+V+TDV DL I+   G++ +A L  Y
Sbjct: 61  SAQVDGDGEFTTPETGQAVISSTETTTAVSDQFITVRTDVYDLQIDRVSGNLVKARLLDY 120

Query: 88  PKELNSTQPFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147
              LNS +P  LL  +   +Y  +SGL GRDGPD+  NG  P+Y+ +  +Y LAEG N+L
Sbjct: 121 DDTLNSEKPLTLLNNTQNRLYVLESGLIGRDGPDSRKNGSAPVYSADAASYELAEGDNQL 180

Query: 148 QVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLD 207
           QV +TYT   G   TK +  +R  Y ++V Y V+N   +  + +  G++ +  +  P   
Sbjct: 181 QVDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDP--- 237

Query: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPH 267
           T  ++  +  F G   S+P++ YEK+ F  + +N+ +N S   GW+A LQ YF +AW+P 
Sbjct: 238 TSQTSMGIQAFLGLVISSPEDPYEKFDFGDLQENQ-INQSVTNGWLAFLQHYFLSAWVPE 296

Query: 268 NDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLT 327
            D    + T   G     +G+      V PG+T  + +  +VGP+I +++  +AP+LD T
Sbjct: 297 RDIPAQYQTTRRGPNYV-MGFVYPATSVAPGETAEIGARAYVGPKIIERLEGMAPNLDRT 355

Query: 328 VDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQ 387
           VD+GWL+FIS PLF +L W HS VGNWG SII++T +V+ + + L+   Y SMAKMR + 
Sbjct: 356 VDFGWLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMAKMRAVA 415

Query: 388 PKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELR 447
           P++  ++E  GDD+QR+SQEMMALYK EK+NPLGGC P+L+QMP+F++LY++L  SV+LR
Sbjct: 416 PQLTRLKELYGDDRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESVQLR 475

Query: 448 QAPFALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFL 507
            APF LWI DLS  DPY+ILPILMG +MF    ++PT   DPMQ KIM  MP+IFTVFFL
Sbjct: 476 HAPFMLWIQDLSVMDPYFILPILMGASMFLQMSLNPTP-PDPMQAKIMKMMPLIFTVFFL 534

Query: 508 WFPSGLVLYYIVSNLVTIIQQQLIYRGLE 536
           WFP+GLVLY++V+N+++I QQ  I R +E
Sbjct: 535 WFPAGLVLYWLVNNILSIAQQWYITRKIE 563