Pairwise Alignments

Query, 467 a.a., chromosomal replication initiation protein (NCBI) from Escherichia coli BW25113

Subject, 444 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  152 bits (384), Expect = 2e-41
 Identities = 123/454 (27%), Positives = 203/454 (44%), Gaps = 45/454 (9%)

Query: 13  LQDELPATEFSMWIRPLQAELS--DNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGAD 70
           LQ      +   W  PL   LS  D  L +  P+ F   W            L  F G D
Sbjct: 10  LQQTCQEQDLRQWYDPLAITLSTNDKRLEVQFPHSFFAQWFSATAQVTFESRLREFLG-D 68

Query: 71  APQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRS 130
              LR+  G      +PQAA                   AP T    D            
Sbjct: 69  GYVLRYSSGNGG---SPQAA------------------PAPKTARQLDYP---------- 97

Query: 131 NVNVKHTFDNFVEGKSNQLARAAARQVA----DNPGGAYNPLFLYGGTGLGKTHLLHAVG 186
               + TFD F+  + NQ   A+A++VA    D     YNP  + GG G GKTHLL A+ 
Sbjct: 98  -FGARFTFDTFLSNRKNQFPVASAKEVARDGRDPHDRVYNPFVVCGGNGNGKTHLLRAIA 156

Query: 187 NGIM-ARKPNAKVVYMHSERFVQ-DMVKALQNNAIEEFKRYYRSV---DALLIDDIQFFA 241
           N +  +R  NA       E   + + + A    A +E ++    +   + L++DD+Q   
Sbjct: 157 NELSRSRDENAIFCGPVDELGTRFEGLSATGAGAAQERQQARSRLCAHEVLVVDDLQRLR 216

Query: 242 NKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELET 301
           ++   Q+E    F+   +  +Q++        +++ +  +L+SR  WGL V +  P+L+ 
Sbjct: 217 DQPFLQDELTFAFDHFHDHGKQMVFACSGKLADLDFLSPKLRSRLEWGLIVELREPDLDV 276

Query: 302 RVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVRE 361
           R+  + +++   +I+L  E +  +A+R R   R L+G L +V A      R I    + +
Sbjct: 277 RLKFIQQQSRSRNIQLSKEHSLTLAQRFRE-FRHLQGILVKVGAYRQLVNRDIQDRELEQ 335

Query: 362 ALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHS 421
            LR   + +   +T D +    AE + I   D++  +R + + + RQ+AM L +EL   S
Sbjct: 336 ILRHTDSGKGNSLTPDAVIAATAEQFGIPARDIIGDKRQQHIVQARQVAMFLCRELLGSS 395

Query: 422 LPEIGDAFGGRDHTTVLHACRKIEQLREESHDIK 455
            P +G  FGG+DH+T ++A RKI+QL++   D++
Sbjct: 396 FPALGRVFGGKDHSTAMYAVRKIKQLQQSDKDMQ 429