Pairwise Alignments

Query, 467 a.a., chromosomal replication initiation protein (NCBI) from Escherichia coli BW25113

Subject, 498 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  221 bits (563), Expect = 4e-62
 Identities = 157/476 (32%), Positives = 233/476 (48%), Gaps = 39/476 (8%)

Query: 3   LSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGL 62
           +S+W Q    L+  L    F +WI PL AE+ D+ L L APN FV  WVRD+ L++I   
Sbjct: 2   ISIWGQIQNILEKSLNPGLFKVWISPLAAEVQDDVLRLVAPNEFVAAWVRDRLLDDIVQA 61

Query: 63  LTSFCG-----------------------------ADAPQLRFEVGTKPVTQTPQAAVTS 93
            T+  G                             A  P      GT+PV   P   ++S
Sbjct: 62  ATTVLGSAPTVVVDAAPQGAGSLSPRMGRAGASASAAVPGANAADGTQPV---PAVQISS 118

Query: 94  NV-AAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARA 152
            V A  A+ A     RAA   +     +P    P     +N + +FD+FV G +N+LA A
Sbjct: 119 AVQAVAARSASGVGARAAHVAQPSQLGLPLDM-PAPNRALNWRFSFDSFVVGPNNELAFA 177

Query: 153 AARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNA--KVVYMHSERFVQDM 210
           A+R +      A + LFL  G GLGKTHL+ AVG  +      A  +V Y+ +E F   +
Sbjct: 178 ASRGICRETLSA-DTLFLSSGPGLGKTHLMQAVGRALCEASNRAAPRVEYLTAEEFATRL 236

Query: 211 VKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDR 270
           + AL+   ++ FK  YR VD LL++D+ F   KER Q+E   T  AL     +++L+S  
Sbjct: 237 IAALKAREVDRFKARYRDVDVLLLEDVHFLQGKERMQDEVLATVKALKSRGSRVVLSSSF 296

Query: 271 YPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLR 330
             +++  ++ +L SRF  G    I+ P  ETR  IL +KA  + + LP  V   +A R+R
Sbjct: 297 AARDLKNLDTQLVSRFCSGFLAHIDKPGFETRRRILCEKARLHQVMLPDNVTDLLADRIR 356

Query: 331 SNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIK 390
           ++VR++E  L+ ++  A    R I+++   E L    A QE ++  + I + V E + I 
Sbjct: 357 TDVRQIESCLHNLVLKAKLLNRQISMEMAWEVLGH-YAQQEVVMDFEGIVRKVCEGFGIS 415

Query: 391 VADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQ 446
              L S+ R R     R     LA++ T+ SL EIGD F  R H+TVL     IE+
Sbjct: 416 PKQLNSRSRKREYVVARNSVFYLARKHTDLSLKEIGDRF-SRRHSTVLKGITSIER 470