Pairwise Alignments

Query, 467 a.a., chromosomal replication initiation protein (NCBI) from Escherichia coli BW25113

Subject, 460 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  361 bits (926), Expect = e-104
 Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 25/476 (5%)

Query: 1   MSLSLWQQCLARLQDELPATEFSMWIRPLQ-AELSDNTLALYAPNRFVLDWVRDKYLNNI 59
           M+   W      L   +    +  WI PL+ A+     +   AP+ FV +WV   Y  +I
Sbjct: 1   MTEDTWGSVQNDLLKTVGQNNYLTWIEPLKFADCRGGVVRFEAPSSFVGNWVARNYREDI 60

Query: 60  NGLLTSFCGADAPQLRFEVG--TKPVTQT-PQAAVTSNVAAPAQVAQTQPQRAAPSTRSG 116
              L S  G +  ++ F+V    +   Q  P+    +   +P  VA  +P  +A S +S 
Sbjct: 61  LHHLVS-AGVEVKRIEFDVAKLAQAARQVRPKGTERTMTPSPGDVAMDKPVPSA-SLQS- 117

Query: 117 WDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGL 176
                AP +P        + TF NFV GK N+LA A+AR+VA+    ++NPLFLYGG GL
Sbjct: 118 -----APLDP--------RLTFSNFVVGKPNELAHASARRVAEGGPVSFNPLFLYGGVGL 164

Query: 177 GKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDD 236
           GKTHL+HA+     AR P  KV+Y+ +E+F+   V+AL++    EFK  +RSVD L++DD
Sbjct: 165 GKTHLMHAIAWEAQARNPGLKVLYLSAEQFMYRFVRALRDRNTMEFKELFRSVDLLMVDD 224

Query: 237 IQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEP 296
           +QF A K+ +Q+EFFHTFNAL++ N+QII+++DR P EI+G+EDR+KSR   GL V I P
Sbjct: 225 VQFIAGKDSTQDEFFHTFNALVDQNKQIIISADRAPGEIDGLEDRIKSRLSCGLVVDIHP 284

Query: 297 PELETRVAILMKKADE-----NDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTG 351
            + E R+ +L ++  +       I +   V   +A+R+ +NVR LEGALNR+IA ++  G
Sbjct: 285 TDYELRLGVLQQRLQDQIAAGETIAVEDGVLECLAQRISTNVRVLEGALNRLIAFSDLVG 344

Query: 352 RAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAM 411
           R IT+D   EAL DL+   +K VT+D I + VA+YY +++ DLL  RR+R++ARPRQ+AM
Sbjct: 345 RRITLDLAHEALSDLIRAHDKKVTVDEIMQAVAKYYNLRMTDLLGPRRTRTIARPRQLAM 404

Query: 412 ALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS 467
            LAK LT  SLPEIG  FGGRDHTTV+HA ++IE L +    I ED  +L+RTL +
Sbjct: 405 YLAKTLTTRSLPEIGRRFGGRDHTTVIHAVKRIEALCDSDPQISEDVRSLLRTLEN 460