Pairwise Alignments

Query, 297 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

Subject, 311 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 155 NNLAVAFLTKIIYQWICL--MYADGK-----KDPQRRQIEKLIATLHASLQQRWSVADMA 207
           +N  V  LT+II+       MY   K     K  +  Q+ K +  +H SL ++W + D+A
Sbjct: 169 SNTLVRKLTEIIFVQALRIHMYKSNKNAGFFKLIENPQLSKTLEAIHHSLDKKWGLDDLA 228

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                S       F   +G TP +Y    RL+ A  LLK+ G SV EV++ + +    HF
Sbjct: 229 GIAGMSRTNYSVKFKELSGMTPLDYLTYCRLEKAKQLLKESGKSVPEVSEAIGYPAHEHF 288

Query: 268 SKAFKHKFGYAPSAVLKNTDQ 288
            K FK K G  PSA  K   +
Sbjct: 289 QKLFKKKIGKTPSAYRKENSE 309