Pairwise Alignments

Query, 394 a.a., 2-module integral membrane pump; multidrug resistance (VIMSS) from Escherichia coli BW25113

Subject, 393 a.a., multidrug effflux MFS transporter from Pseudomonas sp. BP01

 Score =  137 bits (344), Expect = 7e-37
 Identities = 107/391 (27%), Positives = 181/391 (46%), Gaps = 33/391 (8%)

Query: 6   NVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGP 65
           N+ ++L+L  L A G +A   Y+PA   MA+     E  +Q+ + AY L   + QL YGP
Sbjct: 2   NLRMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHIQATLAAYFLGLSIGQLAYGP 61

Query: 66  ISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLY 125
           ++DR GRR  ++ G+++F LA+L      +L  L+ A  +Q +G   G V++R +  D  
Sbjct: 62  VADRFGRRIPLMFGVTLFTLASLACAYAPNLDTLVLARFVQALGGCAGMVLSRAIVSDKC 121

Query: 126 ERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPE 185
           +        S L + + ++P+LAP++GG+L  +  W++ +L L +  AG   +++  +PE
Sbjct: 122 DPVSSAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPE 181

Query: 186 TRPVDAPRTRL---LTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSS 242
           + P   PR  L   L  Y  L  +  F  +   L GG+A           + G    ++ 
Sbjct: 182 SLPEHMPRQPLSGALRQYLRLLADRVFLGH--ALTGGIA-----------IAGMFAYIAG 228

Query: 243 MTVSILFILPIPAAFFGAWFAGRPNKRF----------------STLMWQSVICCLLAGL 286
                + +  +PA  +G W  G     F                + L+ + V   L AGL
Sbjct: 229 SPFVFIKLYDVPAEHYG-WLFGTNAAGFILVAQVNARLLAKRGPAFLLARGVWVYLAAGL 287

Query: 287 LMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIG 346
            +          +W LLVP  +     G + P A++ AM      AG+A AL+G LQ   
Sbjct: 288 ALLGVAALQPAQLWPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCLQFSV 347

Query: 347 SGVLASLSAMLPQTGQGSLGLLMTLMGLLIV 377
           +   A+L  +L       + ++++L G L V
Sbjct: 348 AAGAAALVGLLHDGSAVPMAMVISLCGALAV 378