Pairwise Alignments

Query, 394 a.a., 2-module integral membrane pump; multidrug resistance (VIMSS) from Escherichia coli BW25113

Subject, 402 a.a., multidrug effflux MFS transporter from Dyella japonica UNC79MFTsu3.2

 Score =  134 bits (336), Expect = 6e-36
 Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 15/387 (3%)

Query: 11  LMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRV 70
           L+L LL A+G  A  +Y+PA+  +   L       Q  + A+    G+ QL YGP+SD V
Sbjct: 10  LILGLLSAIGPFAIDMYLPALPTIREALRTDVDTAQMSLMAFFAAVGIGQLIYGPVSDMV 69

Query: 71  GRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQL 130
           GR+P I  G+ +F L ++       + +LIA   +QG+G   G V+ R + RD++     
Sbjct: 70  GRKPPIYFGLVLFALGSIGCAMAPDIHMLIAFRFVQGLGACAGMVIPRAIVRDMHTGHDA 129

Query: 131 RHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVD 190
               SLL +   VSP+LAPL G L+  + +WR  +  + V+        A  + ETRP +
Sbjct: 130 AQLMSLLMLVFSVSPVLAPLTGSLVIRLTSWRGIFWTVAVVAVFGLVLAATALKETRPRE 189

Query: 191 A-----PRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTV 245
           A      RT  L +Y TL  +  +   + +   G+A   A+ A S  ++    GLS    
Sbjct: 190 ARVASNART-ALAAYGTLLRDPHYLGLVFICSFGVASFFAYLANSSFVLIDHYGLSPTLY 248

Query: 246 SILFILPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWIPDWFGVMNVWTLL 303
            + F +   +    A F G   KR+    L+  +V+   L  + + + +  G+ N+  ++
Sbjct: 249 GLAFSVNAVSFIGAAQFTGALGKRYGLPRLVRSAVVGYSLVMVALLLLNLAGIDNLGVMM 308

Query: 304 VPAALFFFG---AGMLFPLATSGAMEPFPFLAGTAGALVGGLQ-NIGSGVLASLSAMLPQ 359
              AL F G    G++ P +   A+E    +AGTA A +G +Q   G+ V+  +   L  
Sbjct: 309 ---ALLFVGYGFLGLVMPSSAVLALEEHGKIAGTASAFLGTIQFATGACVIGVVGRFLDG 365

Query: 360 TGQGSLGLLMTLMGLLIVLCWLPLATR 386
           T +  L  +     + +VL    L  R
Sbjct: 366 TARPMLAGIAACSVIALVLAQRTLRQR 392