Pairwise Alignments

Query, 307 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 314 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 32/309 (10%)

Query: 9   LNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINN 68
           L + +  ++WG + V  + + +   ++  F    R + A + LL    + G  +     +
Sbjct: 18  LKLAMVTMIWGGTFVAGRILSDA--LAPMFAASLRFLLASIALLAFLALAGIPLAR--PS 73

Query: 69  HKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTII--VAWFSLVRKSRPG 126
            K  + L      G     L F   ++  NA+ A+++  L+P +I   +W+    K R  
Sbjct: 74  VKQGLHLAALGFFGIFFYNLCFFYGLQYINASRASLIVALNPAVIGLASWWLF--KERLS 131

Query: 127 ILVFCAILTSLVGTFLLVTHGNPTSLS-----------ISPAALFWGIASAFAAAFYTTY 175
            L    I+  + G  L++   +P+ L            I    L WGI        Y+ +
Sbjct: 132 RLKVAGIVLCIGGAGLVIVSRDPSLLQGAAQGWIGDLLIFGCVLGWGI--------YSLF 183

Query: 176 PSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFV-----VNGSLILAFFYLVVIGTS 230
              L    G L  V WS+L+G L+L    A  G   V     ++    L+  YL V+G++
Sbjct: 184 SRRLNDSLGPLQTVTWSILLGTLMLWLACAAAGEIRVEALRALDLEQWLSLLYLGVLGSA 243

Query: 231 LTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILIS 290
           L +  +  G + IG  ++ +     PL++ LL  LLL    T    +G  +IL  + L +
Sbjct: 244 LAYIAWYDGIRRIGATRSGVFIALNPLTAVLLGALLLDERLTALMCVGGGVILVGIFLCN 303

Query: 291 MDSRRRARK 299
               R   K
Sbjct: 304 KPLARSKEK 312