Pairwise Alignments

Query, 307 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 323 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 36/299 (12%)

Query: 11  VLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHK 70
           VL+AA LW   G  A+Y + +     + +   R  F  L     +  HG     +    +
Sbjct: 9   VLLAAGLWALIGPLARYCLAEGVTPLE-IAFWRATFGALFFGLHAARHGLWRAPV----R 63

Query: 71  DAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVF 130
           DA +   F +VG      ++ L + +  AA A++L + +P    AW +L+ +     L F
Sbjct: 64  DAATFAAFGLVGVALFFGSYQLAVREGGAALASILLYTAP----AWVALLSR-----LCF 114

Query: 131 CAILT---------SLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIA 181
              LT         ++ G FL+   G       S A + +G+ + F  + +  +    + 
Sbjct: 115 AEPLTRAKLAALGLAMTGAFLICRSGGGLQGGASAAGIGFGLLAGFTYSLHYVFSRHFLH 174

Query: 182 RYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSL-----TFSLY 236
           R+  + +  + + +G L LLPF       F   G L  A   L+V+G  L      +  Y
Sbjct: 175 RHSPVTLYLFCLPVGALALLPF-----VTFAPKGPLAWA---LLVLGMGLVTTYGAYMAY 226

Query: 237 LKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRR 295
            +G + +   + ++++  EP+ +ALL+  L    F    W+G  L++++V  + +D  R
Sbjct: 227 CEGMRRLSPTRVAVVANFEPVLAALLAYWLWDELFPPSGWIGAGLVIAAVFCVVLDGAR 285