Pairwise Alignments

Query, 307 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 292 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 69/296 (23%), Positives = 116/296 (39%), Gaps = 32/296 (10%)

Query: 11  VLIAAVLWGSSGVCAQYIMEQSQMSS----QFLTMTRLIF-------AGLILLTLSFVHG 59
           +++A V WG + V  +     +   S    +F   T L+F         L  LT   +HG
Sbjct: 7   LMLATVFWGGTFVAGRIAAAHAGPFSAAFLRFAMATGLLFWYVRRREGALPRLTSPGMHG 66

Query: 60  DKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSL 119
                          +L+    G       F   +    A+ A V+   +P  I    +L
Sbjct: 67  ------------WAGVLLLGATGVFAYNALFFTGLATVPASRAAVIVTNNPIAIAVGAAL 114

Query: 120 VRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAA----AFYTTY 175
                        IL S+ G  + +T GNP  L++  +AL WG  +        A Y+  
Sbjct: 115 FLGEPLSRRKLAGILLSVGGAVIAITRGNP--LTLFSSALSWGDVALLGCLASWAAYSLL 172

Query: 176 PSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVV---NGSLILAFFYLVVIGTSLT 232
              ++     L  V WS  +G ++LLPF   +G    +     +L +A  YL V GT L 
Sbjct: 173 GKVVMRALSPLAAVTWSCAVGTVMLLPFALHEGLWTALPEYPAALWIAAAYLGVFGTVLG 232

Query: 233 FSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVIL 288
           F+ + +  + IG  +A +     PL++ + +  +LG    +   LG  L+   V +
Sbjct: 233 FTWFYEAVKEIGAGRAGVFINFVPLTAIVCAWAMLGEALPVSLLLGAALVTCGVFI 288