Pairwise Alignments

Query, 307 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 294 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 15/289 (5%)

Query: 7   GMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSII 66
           G L VL+AA LW   G  A++ M++  +S   + + R  F  L     ++  G  ++ + 
Sbjct: 3   GYLLVLLAASLWALIGPLARFCMDEG-LSPPEIALWRAAFGALFFALHAWRCG--LWRVD 59

Query: 67  NNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPG 126
             H  A+S   F +VG   +  ++   +++  AA A VL + +P  +     L+      
Sbjct: 60  PRHGAAMSA--FGIVGVGVLFGSYQYAVQEGGAALAAVLLYTAPAWVAVLSRLLLHEPLT 117

Query: 127 ILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTL 186
                A++ ++ G  L    G   S   S A +  G+ S FA + +  + +  + RY  +
Sbjct: 118 RRKLAALVVAMTGAVLTCLSGGGLSGGASTAGIVAGLISGFAYSLHYIFSAHWMRRYSPV 177

Query: 187 PVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFS---LYLKGAQLI 243
            +  + +  G   L+PF     T F        A+  LV IG   T+    +Y +G + +
Sbjct: 178 TLYLYCLPAGVATLVPF-----TTFTHKTPT--AWLLLVAIGLLTTYCAYFVYCEGIRRL 230

Query: 244 GGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMD 292
              + +I++  EP+ +ALL+ L  G  F    WLG  L+L++V LI +D
Sbjct: 231 APTRVAIVANLEPVLAALLAYLWWGELFPPLGWLGAGLVLTAVFLIVLD 279