Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 381 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  336 bits (861), Expect = 7e-97
 Identities = 168/377 (44%), Positives = 252/377 (66%), Gaps = 2/377 (0%)

Query: 1   MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKA 60
           MDLL++LTY A+   +FK+F+IP+N+WT+ TA LGG+ L+  L+LLMNYNHPY+  A++ 
Sbjct: 1   MDLLLILTYAAICVVIFKVFKIPLNKWTVPTAVLGGIVLLGTLLLLMNYNHPYSRFAREY 60

Query: 61  VIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTL 120
            + +PI P VTG V EV    N  I++GEVLF+LDP  +++ + + QA L  A   +  L
Sbjct: 61  FVTVPINPLVTGKVVEVAVMPNVPIREGEVLFRLDPRPFESALIQKQAALKAAEQEVPQL 120

Query: 121 RAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQ--AAVNPFSERDIDDARQNFLAQDALV 178
            A    A+A+  +  A+RDR    Y+RY  G +   A +PF+  ++D+ RQ + A +A +
Sbjct: 121 EAAWETARASVERAQADRDRSKSEYERYEAGRRKGGANSPFTALELDNKRQLYFAAEAQL 180

Query: 179 KGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPG 238
             + AE+ +++   +S ++G  +++ + RA++ +A+++LEQ+V+RAP++G VT + +RPG
Sbjct: 181 TAARAEEMRVRYAYESNIDGVNTKVAAARAEVAKAEFDLEQSVVRAPTDGVVTHMALRPG 240

Query: 239 TYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL 298
                +PLRPVM FIP ++R  V  F QNS+LRLK GD AEV+ +A PGQVF G++  +L
Sbjct: 241 MVVVPMPLRPVMSFIPNEQRYFVGAFWQNSMLRLKAGDQAEVILDAAPGQVFKGRVARVL 300

Query: 299 PVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVS 358
           P +  G  QA G LQS   +     VL  IE D +D+I A P G+  QVA+Y+DHFSHV+
Sbjct: 301 PAMAEGEVQANGQLQSSARMFQRGRVLVMIEFDRSDEIQAFPAGVAGQVAIYTDHFSHVA 360

Query: 359 VMRKVLLRMTSWMHYLY 375
           VMRKVLLRM  W++YL+
Sbjct: 361 VMRKVLLRMQGWLNYLF 377