Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 354 a.a., multidrug resistance efflux pump (RefSeq) from Shewanella amazonensis SB2B

 Score =  113 bits (282), Expect = 9e-30
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 7/247 (2%)

Query: 52  PYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLM 111
           P T  A      + ITP+V G + +V   N++ ++ GE+LF++D  +YQ   ++ QADL 
Sbjct: 34  PMTTQAFVHAYLVRITPEVAGNIVQVNVDNDKRVEAGELLFEIDATQYQIAREKAQADLE 93

Query: 112 TATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNF 171
               ++    A +  AQA      A  D       R    ++  V   S+ ++D+AR+  
Sbjct: 94  RVGQSLGASTAAVQVAQAKVGDARAALDNAKAQATRVETLAERGV--LSQAELDNARE-- 149

Query: 172 LAQDALVKGSVAEQAQIQSQLDSMVNGEQS-QIVSLRAQLTEAKYNLEQTVIRAPSNGYV 230
            AQ A      A+ + +Q++ +    GE + ++ +  A L +A+ +L++T + APS G V
Sbjct: 150 AAQRAQASLEAAQASLLQAKQNLGPVGENNPELKAAMAALAKAELDLKRTRVVAPSRGVV 209

Query: 231 TQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVF 290
           T V + PG Y A  P +P + FI  ++  I A  R+NSL  ++ G    +VF+ALPG+VF
Sbjct: 210 TNVQLSPGQYMA--PGQPALTFIDPREVWISAMMRENSLEHIREGGKVGLVFDALPGRVF 267

Query: 291 HGKLTSI 297
            G + SI
Sbjct: 268 EGVVDSI 274