Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 352 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (269), Expect = 3e-28
 Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 28/359 (7%)

Query: 29  LATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKG 88
           L   A+ G   V G  +  +   P T  A    +   +TPQ++G +  +  KNNQ++ KG
Sbjct: 10  LVKIAMFGFVAVFGYFMFADAMMPLTPQAMATRVVTKVTPQISGKIQTINVKNNQVVAKG 69

Query: 89  EVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQL----TEAQANTTQVSAER---DRL 141
           ++LF++DP  ++  V + +  L     +   L A L     E  A+TT    +R    RL
Sbjct: 70  DLLFQVDPAPFELAVSQAKLALEQVRQDNAELDASLLAAKAEVNASTTTAQLKRREAKRL 129

Query: 142 FKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDA-LVKGSVAEQAQIQSQLDSMVNGEQ 200
              Y  +  G        ++ D D A  N LA +A L K  V+           +   E 
Sbjct: 130 DALYATH--GVSQQQRDQADSDADAAEANLLAANARLDKLKVSR---------GLYGEEN 178

Query: 201 SQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQI 260
            ++   +  L +A+ NL  T IRA  +G VT + +  G++AA    +P++  + + K  I
Sbjct: 179 LRVRQAKNALEQAELNLSYTQIRADQDGVVTNLQLEVGSFAAV--GQPLLALVSD-KLDI 235

Query: 261 VAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVL----QSLT 316
           +A FR+ +L  +     A + F+  PG+++  +++S+   V  G + A G L    +S  
Sbjct: 236 IADFREKTLRGVNASYPALIAFDGEPGRLYRAQVSSVDAGVSAGQFDANGRLAAPQESDR 295

Query: 317 VVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLY 375
            V     +   + LD N  ++ LP G  A V +  D+ +  S++ KV +++ S +HY+Y
Sbjct: 296 WVRDAQRLRLHLVLDDN-AMNNLPAGARATVQLLPDN-TLFSLLAKVQIKVISLLHYIY 352