Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 381 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  337 bits (865), Expect = 2e-97
 Identities = 171/379 (45%), Positives = 251/379 (66%), Gaps = 2/379 (0%)

Query: 1   MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKA 60
           MDLL++LTY ++   +FK+F+IP+N+WT+ TA LGGV L+  L+L+MNYNHPY+  A++ 
Sbjct: 1   MDLLLILTYASICIVIFKVFKIPMNKWTVPTAVLGGVVLIGALLLIMNYNHPYSRFAREY 60

Query: 61  VIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTL 120
            + IPITP V G+V  V  K N  +++G+VLF++DP  ++A V R +A L+ A   +  L
Sbjct: 61  YVTIPITPAVKGLVISVEAKPNTPMKQGDVLFRIDPTPFEAVVKRKKAALLAAEQEVPQL 120

Query: 121 RAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQ--AAVNPFSERDIDDARQNFLAQDALV 178
            A    A+AN  +V+A+R+R    Y RY +G +   A +PF+  ++D+ RQ F A +A +
Sbjct: 121 AAAWEAAKANVARVAADRERNKSAYDRYEQGHRKGGANSPFTALELDNRRQLFFASEAQL 180

Query: 179 KGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPG 238
             + AE+ + +   +S V+G  S++  L+  L  A YNLEQTV+RAP++G VTQ+ +RPG
Sbjct: 181 TAAQAEELRARLAYESNVDGVNSKVAGLQGDLESALYNLEQTVVRAPADGIVTQMALRPG 240

Query: 239 TYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL 298
             A  LPLRPVM FIP+++R     F QNSLLRL+ GD+AEVV +A PGQVF GK+  +L
Sbjct: 241 AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLQEGDEAEVVLDAAPGQVFKGKVAKVL 300

Query: 299 PVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVS 358
           P +  G  Q  G LQS   +  +  V+  I+++ +      P G+  QVAVY++HF HV+
Sbjct: 301 PAMAEGEIQMNGTLQSSNQLFQSGRVIVLIDIEDDAIRRQFPAGVAGQVAVYTEHFHHVA 360

Query: 359 VMRKVLLRMTSWMHYLYLD 377
           VMRKVLLRM  W++YL+ D
Sbjct: 361 VMRKVLLRMQGWLNYLFFD 379