Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  100 bits (248), Expect = 8e-26
 Identities = 90/358 (25%), Positives = 170/358 (47%), Gaps = 22/358 (6%)

Query: 32  AALGGVFLVSGLIL---LMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKG 88
           A LG + L+  L+L   + +   PY+  A+     +PI  +VTG + +V  ++NQ + +G
Sbjct: 15  ATLGLLALIVILLLWYLVADRMTPYSSQARVQAFVVPIATEVTGQILKVYVQDNQDVAEG 74

Query: 89  EVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRY 148
             LF +DP  Y   + + ++D  T  +++K     +  A+A    + A  +   K+ +R 
Sbjct: 75  APLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSVKDAERQ 134

Query: 149 LKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSM-VNGE-QSQIVSL 206
            +  +      S R ++ A+    +++       A +A ++  +++  VNGE  SQ++S 
Sbjct: 135 ERLYRQDPGAISVRRLEIAQ---ASRETASSQVTAAEADVRRAIEAAGVNGENNSQLLSA 191

Query: 207 RAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQ 266
           R+ + +A+ + + T + APS G +T +    G +  A    P M  I      I A   +
Sbjct: 192 RSAVNKAERDRQNTHVVAPSRGVITDLNTDVGQFINA--GAPAMTLIAIHDVWISADLTE 249

Query: 267 NSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLG 326
           N+L  +K G+   ++ +++PGQ+F G++ SI   V  G  QA G   SL  V  +   L 
Sbjct: 250 NNLGNIKVGNRVSILLDSMPGQLFSGQIRSIGYGVDDGKKQAVG---SLPTVSNSRDWLR 306

Query: 327 TIELDP---NDDIDALPD------GIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLY 375
             +  P   +   D +P       G  A + VY++    ++ +  + +R+ S   YLY
Sbjct: 307 QAQRFPVKVSFSADDMPPAANLRVGGQADILVYTEEHGLMNPLGALYIRVMSLFSYLY 364