Pairwise Alignments

Query, 392 a.a., DNA-binding transcriptional activator, xylose-binding (NCBI) from Escherichia coli BW25113

Subject, 305 a.a., protein containing helix-turn-helix, AraC domain from Marinobacter adhaerens HP15

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 17/175 (9%)

Query: 216 IGIDNEELTRYLSRVALSSV----AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV 271
           +G D     R+L R     V        RQ G++A  L+H      ++    +   P+  
Sbjct: 137 MGFDGPTRIRHLGRQPRLLVDFNGLLSVRQTGFRARGLIHAANRLRQL----LAAVPI-- 190

Query: 272 IERRSTDYRSLTDPAVIQAMH-YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET- 329
               + D       A ++ +H Y+R H  + I ++Q+ D  G+S ++   R++E+ G + 
Sbjct: 191 ----NADETGHERQAELETIHNYMREHLDERISLEQLADLAGLSPAHFATRYREQTGTSP 246

Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384
           I   +H  K+E+A  +L +++LS  +IS+  GY    YF  +FKK    +P++YR
Sbjct: 247 IQHFLHL-KVERACQMLDTSSLSFADISRRLGYDDAYYFSRLFKKVMGQSPRDYR 300