Pairwise Alignments

Query, 392 a.a., DNA-binding transcriptional activator, xylose-binding (NCBI) from Escherichia coli BW25113

Subject, 299 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 14/174 (8%)

Query: 216 IGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERR 275
           +GI NEEL    SR    + A       Y +  +LH             ++  +  I + 
Sbjct: 139 VGI-NEELVSLFSRALEVAEADKISAQQYLSGIVLH-------------MIGMILSISKN 184

Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335
                S  D  + QA   +  +    I  +++   + IS S   + FKE  G        
Sbjct: 185 KVFEMSDVDQKIEQAKILMNENVSGNIDPEELAMRLNISYSWFRRVFKEYTGYAPAKYFQ 244

Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389
             KL KA+ +L+ T+ S+ EIS   G+ S +YF+S FKK    TP EYR    E
Sbjct: 245 ELKLRKAKQMLVGTSQSVKEISFFLGFQSTEYFFSFFKKRTGLTPLEYRSFGRE 298