Pairwise Alignments

Query, 392 a.a., DNA-binding transcriptional activator, xylose-binding (NCBI) from Escherichia coli BW25113

Subject, 381 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  139 bits (351), Expect = 1e-37
 Identities = 92/386 (23%), Positives = 192/386 (49%), Gaps = 20/386 (5%)

Query: 7   RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-------RARIDKIKDWLGDG 59
           +I LL + +  +DR+++ G+ +Y + +   W  +    +       +  +   K+W  D 
Sbjct: 3   KILLLIDYSSEFDRKLLRGLVQYSKEN-GPWLFYRLPSYYSGMYGEKGILKWAKEWKADA 61

Query: 60  VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119
           +I  +++  +   L ++++PIV +   +H + +Y     +  D       A     ++  
Sbjct: 62  IIGQWNNDTVN-LLKELNIPIV-LQNYHHRSTTYSN---LTGDYKGTGRMAAQFFAKRMF 116

Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179
           + FA++G+   +G  W+ ER   FRQ   E K  G  +   E+  ++    +  ++ WLQ
Sbjct: 117 HNFAYFGI---NGVVWSDERCEGFRQ---EVKRIGGNFYCFES-DKHEDEIRIEVSQWLQ 169

Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239
            LP    +    D+ A  I + C+  +I +PE++ ++G+DN++L   +S   +SS+    
Sbjct: 170 ELPKPIALFCCDDSHALFISETCKISNIHIPEEISLLGVDNDDLICNISDPPISSIELEV 229

Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299
            + GY   +L+H+ + KE      I++ P+R+  R+ST+  ++ DP +++ + YI +H  
Sbjct: 230 ERGGYSIGRLIHQQIKKEHEGTFNIVINPIRIELRQSTEKHNIKDPYILEVVKYIESHYN 289

Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359
             + ++ +L  + +SR N E +FK  +  +I+  I   ++     LL++T  S+ +I+  
Sbjct: 290 SDLTIESLLAQIPLSRRNFEVKFKNAMHTSIYQYILNCRVNHLADLLLTTDRSLADIATE 349

Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRD 385
            G+        +FKK    +P EYR+
Sbjct: 350 AGFKDYNNISRIFKKFKGCSPLEYRE 375