Pairwise Alignments

Query, 402 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 447 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  127 bits (318), Expect = 8e-34
 Identities = 102/411 (24%), Positives = 186/411 (45%), Gaps = 31/411 (7%)

Query: 11  WLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQ 70
           W  +IG +         Y W+LF   ++A+     + +  +F +  L       + G L 
Sbjct: 19  WQLVIGMVCMALVANLQYAWTLFVTPMNARHHWGEASIQLAFAIFILTETWLVPLEGWLV 78

Query: 71  ERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFP 130
           ++FG + V     I  G+ + + ++   L ML++SA V+ G+  G  Y   + N +KWFP
Sbjct: 79  DKFGPRPVVAGGAICAGIAWVMNSYITTLPMLYVSA-VIAGIGAGGVYGTCVGNALKWFP 137

Query: 131 ERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIVFGATLMKD-- 188
           +++GL +      +G G+         ++   G E TF  +G +    I+  A L+K   
Sbjct: 138 DKRGLAAGLTAAGFGAGAAVTVIPIANMITRSGYEHTFFFFGILQGGCILALALLLKKPN 197

Query: 189 -----APKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIG----VAKD 239
                APK++   S    + D+T  + ++ P +W++ V F+     GL        +AKD
Sbjct: 198 LRSQAAPKKKFAVS----KVDFTPGQMIKTPVFWVIYVSFVAVAAGGLMATAQIGPIAKD 253

Query: 240 -----IAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIAR---IRVITIGQVISL 291
                I  ++  + +      +++ ++ N   R + G +SDK+ R   + VI IG+ ++L
Sbjct: 254 WGLARIPMTIFGMTLPLLTATLSIDNVCNGFTRPLCGFISDKLGRENTMFVIFIGEGLAL 313

Query: 292 VGMAALLFAPLNAVTFFAAIACVAFNFGGTI-TVFPSLVSEFFGLNNLAKNYGVIYLGFG 350
           +G+      P   +TF A I    F F G I ++FP++ ++ FG    A N G +Y   G
Sbjct: 314 LGLMQYGTNPYAFMTFAALI----FLFWGEIFSIFPAICADTFGSKYAAANAGTLYTAKG 369

Query: 351 IGSICGSI--IASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAH 399
             S+   I  + S  GG+ + F V   + I +   +  +  P +    E H
Sbjct: 370 TASLLVPIASVLSATGGWNLVFIVSAVVTIAAGVAAKFVLAPMRSRWIETH 420