Pairwise Alignments

Query, 334 a.a., dipeptide transporter (NCBI) from Escherichia coli BW25113

Subject, 339 a.a., peptide ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN

 Score =  373 bits (958), Expect = e-108
 Identities = 189/317 (59%), Positives = 233/317 (73%), Gaps = 1/317 (0%)

Query: 12  LLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMI 71
           +L A  L ++Y VK+GMFA    VKAL+GVSF LERGKTLAVVGESGCGKSTL R LTMI
Sbjct: 18  VLVAEQLARYYTVKRGMFA-SGTVKALNGVSFALERGKTLAVVGESGCGKSTLARQLTMI 76

Query: 72  EMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTS 131
           E P+ G L   G+D+   D       R+++Q+VFQNP+ SLNPRK V Q L EPL INT 
Sbjct: 77  EAPSAGRLLIDGEDVAGADHAKIAALRRRVQMVFQNPFASLNPRKTVEQTLGEPLAINTQ 136

Query: 132 LSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSA 191
           LS  +R E+   MM  VGL+ EH  RYPHMFSGGQRQR+AIAR ++LDP +V+ADEPVSA
Sbjct: 137 LSATERAERIAQMMRTVGLRPEHAKRYPHMFSGGQRQRVAIARAMILDPQIVVADEPVSA 196

Query: 192 LDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFN 251
           LDVS++AQ+LNL MDLQ++   SYVFISH+LSVVEHIAD+VMVMY G   E G K +IF+
Sbjct: 197 LDVSIQAQILNLFMDLQEQFKTSYVFISHNLSVVEHIADDVMVMYFGGVAELGDKKRIFS 256

Query: 252 NPRHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQP 311
           NPRHPYT+AL+SATP +   DR  +IKL GE+PSPLNPP GC F+ RC      C   +P
Sbjct: 257 NPRHPYTRALMSATPSIFEADRTIKIKLQGEMPSPLNPPSGCTFHQRCPYVIDRCRSEEP 316

Query: 312 QLKDYGGQLVACFAVDQ 328
           +L++  G+ V+C   ++
Sbjct: 317 KLREVDGRQVSCHRAEE 333