Pairwise Alignments

Query, 662 a.a., predicted diguanylate cyclase (RefSeq) from Escherichia coli BW25113

Subject, 686 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  236 bits (601), Expect = 3e-66
 Identities = 181/672 (26%), Positives = 323/672 (48%), Gaps = 33/672 (4%)

Query: 1   MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60
           + +  SL+ K + +V    L    +     +     + R       + I R  R+P + A
Sbjct: 3   LEIRNSLSRKLLRVVLLSALAVGLVLSCAQIIFGAYKTRQLIEADAQRILRMTRDPSTQA 62

Query: 61  ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPV-- 118
           I   D      ++  +     +  A +  P++     K     RP   + TR    P+  
Sbjct: 63  IYSLDREMGAQVMEGLFQHESIRMASIGHPDEGMLALKI----RPPISLPTRWLTDPILG 118

Query: 119 ---QISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAIS 175
              Q S+ +  + +P   +    L +  D+ +  +  ++    +  + LL +L L   + 
Sbjct: 119 RDQQFSIPL--IGKPPYNEYYGELRITLDTAQYGQEFVNDSVVIFILGLLRALTLGFVLF 176

Query: 176 WCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYN-------LNQ 228
                L+  PL  +   L  I       H+L + R H+ +E+G+ V + N        N 
Sbjct: 177 LIYQWLLTRPLTKLIEHLAQINPDRPGEHKLPMIRGHERNELGLWVETANGLLASIEHNM 236

Query: 229 QLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV--ARKQTTALMIITCETLRDTAGV 286
            L Q      +       ++ LPN+  L   L+ ++  AR+    + ++ C  L D  GV
Sbjct: 237 HLRQEAESSLHRLTQYDSLTGLPNRQQLQSQLDHILDEARRLQRRIAVL-CLGLDDFKGV 295

Query: 287 LKEAQREI---LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLT 343
            ++   +    +L  L ++L++  +    LA++ G  F ++ +G+++P+ A  L Q VL 
Sbjct: 296 NEQYSYQAGDYMLQALADRLRASETRLGALARLGGDQFVLVLSGIEQPYEAAELAQAVLD 355

Query: 344 IMSERLPIERIQLRPHCSIGVAMFY--GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401
            +   + ++   +R   +IG+ ++   GD T E+L  +A      A+ + +N+ QF+   
Sbjct: 356 DLENPIELDGHPIRLRATIGITLYPEDGDNT-EKLLQKAEQTMTLAKSRSRNRYQFYVAS 414

Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461
                + R   E D+  AL+ ++F +  QPQV+    ++   E L+R + P G    PD 
Sbjct: 415 IDSEMRARRELEKDLSEALKRNEFHLVYQPQVDYRHNRITGVEALIRWKHPQGKLVPPDL 474

Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLEL 520
            I   E  G ++ +G WVL+++C  L  W  +G   L ++VNLS +QL HP + A + EL
Sbjct: 475 FIPLAEQNGSIIEIGQWVLDQACSQLRQWHAQGHTGLRVAVNLSTVQLRHPQLPAMIGEL 534

Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580
           L ++++   TL LEVTE+  ++D  AA   L  LR +G  +A+DDFG GY+    L ++K
Sbjct: 535 LHKHQLPAETLELEVTETGLMEDIDAAANNLHSLRRSGALIAIDDFGTGYS---SLSYLK 591

Query: 581 SLPIDVLKIDKMFVEGLPGD--SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638
           SLP+D +KIDK FV+ +  D  ++++ A+I L +SL + +IAEGVET AQ  +L   G  
Sbjct: 592 SLPLDKIKIDKSFVQDIGQDEGATIVRAVIQLGKSLGMTVIAEGVETPAQEAYLIAEGCQ 651

Query: 639 IAQGFLFARPLP 650
             QG+ +++PLP
Sbjct: 652 EGQGYYYSKPLP 663