Pairwise Alignments

Query, 662 a.a., predicted diguanylate cyclase (RefSeq) from Escherichia coli BW25113

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  222 bits (566), Expect = 6e-62
 Identities = 137/427 (32%), Positives = 235/427 (55%), Gaps = 16/427 (3%)

Query: 242 AMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLL 297
           A   P++ LPN+ LL + L   +A          ++ I  +  +     L  +  + L+ 
Sbjct: 531 AQHDPLTGLPNRMLLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSLGHSVGDELIK 590

Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357
            + ++L+  +     ++++ G +F V+ + ++    A  +   VL  ++    I   +LR
Sbjct: 591 GVTKRLQDAVRESDTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQLTAPFNIAGKELR 650

Query: 358 PHCSIGVAMFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416
              SIG+++F  D   E+ L   A +A F A+ +G+N  QFF P+    A +RL  E+ +
Sbjct: 651 VTASIGISVFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERLALENSL 710

Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476
             A++  +F ++ QPQVE+ SG+LV AE L+R ++ D  +  P   I   E  G ++ +G
Sbjct: 711 RGAVQRKEFVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILEIG 770

Query: 477 HWVLEESCRLLAAWQER----GIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTL 531
            WVL E+CR    W ++    G+  +P++VNLS+LQ    +   ++L+++  Y +  G +
Sbjct: 771 DWVLAEACRQQVQWDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVGDYPLPAGRI 830

Query: 532 ILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDK 591
            LE+TES  +++P    A+L  L+ AG+R+++DDFG GY+    L ++K  P+D LKID 
Sbjct: 831 ELELTESIVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYS---SLSYLKRFPLDKLKIDA 887

Query: 592 MFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648
            FV  +  DS+ +A   A++ L  SL L+++AEGVE EA+   L   G  IAQG+ F RP
Sbjct: 888 SFVRDIVNDSADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCRP 947

Query: 649 LPIEIFE 655
           +P E F+
Sbjct: 948 VPAEEFQ 954