Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 525 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  171 bits (434), Expect = 2e-47
 Identities = 104/253 (41%), Positives = 150/253 (59%), Gaps = 12/253 (4%)

Query: 5   IELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGE 63
           IE+R++++    Q +V  +SL ++RG  LALVG SGSGKS+T  + L +LP     T G 
Sbjct: 6   IEIRDLSVAFNGQKVVSNLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGTLTTGS 65

Query: 64  ILADGKPVSPC------ALRGIKIATIMQNPRSAFNPLHTMHTHARETCL----ALGKPA 113
           I   G+ +          LRG +IA I Q P ++ NPLH++     ET L      G+ A
Sbjct: 66  ITYRGQQLVGADDRTLRELRGNRIAMIFQEPMTSLNPLHSVAKQIGETLLLHRGVSGREA 125

Query: 114 DDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDV 173
               +   +E VG++   + LK YP E+SGG  QR+MIAMA+ CE   +IADEPTT LDV
Sbjct: 126 QKR-IVELLELVGIQQPEKRLKAYPHELSGGQRQRVMIAMALACEPELLIADEPTTALDV 184

Query: 174 VAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPK 233
             Q +IL LL+ + Q+    +LL++HD+ +V  +A  V VM  G+IVEQ D ++LF +P+
Sbjct: 185 TVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQSDCKSLFKSPQ 244

Query: 234 HTVTRSLVSAHLA 246
           H  +R L+ A  A
Sbjct: 245 HPYSRLLLDAEPA 257



 Score =  120 bits (302), Expect = 4e-32
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 19  VHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPA-GVRQTAGEILADGKPVSPCALR 77
           V  +SL+++RG+ L +VG SGSGKS    A L +L + G  +  G+ L DG         
Sbjct: 296 VDDISLSIERGKTLGIVGESGSGKSTLGQAILRLLESRGSIRFRGQAL-DGLSQKQMRPW 354

Query: 78  GIKIATIMQNPRSAFNPLHTMH---THARETCLALGKPADDATLTAAIEAVGLENAARVL 134
             ++  + Q+P  + +P  ++    +   E          DA +  A+E VG++  +R  
Sbjct: 355 RKEMQVVFQDPYGSLSPRMSVAQIISEGLEVHSQYNPAKCDAEVIRALEEVGIDPQSR-- 412

Query: 135 KLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQAPGM 194
             YP E SGG  QR+ IA A++ +   I+ DEPT+ LD   Q +++ LL  + +K     
Sbjct: 413 HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRELQEKHGLTY 472

Query: 195 LLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVSA 243
           L ++HD+ VV  LA DV V+ DGK+VE+G    +F AP+H  T+ L++A
Sbjct: 473 LFISHDLAVVKALAHDVIVVKDGKVVERGASHDVFEAPQHPYTQELLAA 521