Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 536 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (420), Expect = 9e-46
 Identities = 104/256 (40%), Positives = 150/256 (58%), Gaps = 19/256 (7%)

Query: 5   IELRNIALQ-----AAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILP----- 54
           IE+R++A++     + Q +V  +S  ++RG  LALVG SGSGKS+T  + L +LP     
Sbjct: 7   IEIRDLAVEFVTGDSRQRVVENISFDIRRGETLALVGESGSGKSVTAHSILRLLPYPIAS 66

Query: 55  --AGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLAL--- 109
             +G    AGE L   +      +RG +IA I Q P ++ NPLH++     E  L L   
Sbjct: 67  HPSGTIHYAGEDLLKVEEKKLRTIRGNRIAMIFQEPMTSLNPLHSVEKQINEV-LGLHKG 125

Query: 110 --GKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEP 167
             GK A + TL   ++ VG+    + LK  P E+SGG  QR+MIAMA+  E   +IADEP
Sbjct: 126 LTGKAATERTLEL-LDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184

Query: 168 TTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVET 227
           TT LDV  Q +IL+LL+ +  +    +LL++HD+ VV ++A+ V VM  G IVEQ   E 
Sbjct: 185 TTALDVTVQLKILELLKQLQARLGMALLLISHDLNVVRQIANRVCVMQRGCIVEQASCEE 244

Query: 228 LFNAPKHTVTRSLVSA 243
           LF +P+H  T+ L+SA
Sbjct: 245 LFRSPQHPYTKVLLSA 260



 Score =  113 bits (283), Expect = 7e-30
 Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 19  VHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALRG 78
           V G+  +L +G+ L +VG SGSGKS     TLG+    +  + G I   G  +   + + 
Sbjct: 302 VDGIRFSLPQGQTLGIVGESGSGKS-----TLGLAILRLIGSQGTIRFKGNALESLSQQQ 356

Query: 79  IK-----IATIMQNPRSAFNPLHTMHTHARETCL--ALGKPADDAT-LTAAIEAVGLENA 130
           I+     +  + Q+P  + +P  ++     E      +G PA+  T +  A+  VGL+  
Sbjct: 357 IRPLRRQMQVVFQDPFGSLSPRMSVAEIVGEGLRIHGMGTPAEQQTAIIEALREVGLDPD 416

Query: 131 ARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQ 190
            R    YP E SGG  QR+ IA A++ +   I+ DEPT+ LD   Q ++++LL S+  K 
Sbjct: 417 TR--HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKY 474

Query: 191 APGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVSA 243
               L ++HD+ VV  L+  + V+  G++VEQG  + +F AP+H  T+ L+ A
Sbjct: 475 NLTYLFISHDLAVVKALSHQLMVVKQGQVVEQGAAQDIFAAPQHPYTQQLLEA 527