Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 527 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  187 bits (474), Expect = 5e-52
 Identities = 110/250 (44%), Positives = 155/250 (62%), Gaps = 12/250 (4%)

Query: 5   IELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGE 63
           IE+R++ +      +VHGVSL ++RG  LALVG SGSGKS+T  + L +LPA    T G 
Sbjct: 6   IEIRDLRVAFNGHEVVHGVSLDIRRGECLALVGESGSGKSVTAHSILRLLPAKTVSTQGS 65

Query: 64  ILADGKPVSPCA------LRGIKIATIMQNPRSAFNPLHTMHTHARETCLA----LGKPA 113
           I  DG  +   +      LRG ++A I Q P S+ NPLHT+     E  +      GK A
Sbjct: 66  IHYDGLDLVTASDKQLRSLRGNRVAMIFQEPMSSLNPLHTVEKQIVEILVTHKGLKGKAA 125

Query: 114 DDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDV 173
              TL   +E VG+ +    LK YP ++SGG  QR+MIAMA+  E   +IADEPTT LDV
Sbjct: 126 LSRTLEL-LELVGIRDPLSRLKAYPHQLSGGQRQRIMIAMALANEPDLLIADEPTTALDV 184

Query: 174 VAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPK 233
             Q +IL+LL+S+ Q+    +LL++HD+ +V R+A  V VM +G+IVEQ D +TLF++P+
Sbjct: 185 TVQVKILELLKSLQQRLNMSLLLISHDLNLVRRIAQRVCVMREGEIVEQADCQTLFDSPQ 244

Query: 234 HTVTRSLVSA 243
           H  +R L++A
Sbjct: 245 HPYSRLLINA 254



 Score =  116 bits (290), Expect = 1e-30
 Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 9/228 (3%)

Query: 19  VHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPA--GVRQTAGEILADGKPVSPCAL 76
           V GVS  L +G+ L +VG SGSGKS    A L ++ +   +R    E+    + +     
Sbjct: 296 VDGVSFELLKGKTLGIVGESGSGKSTLGQAILRLVDSEGSIRFGTKELSLHSQHLMRPLR 355

Query: 77  RGIKIATIMQNPRSAFNPLHTMHTHARETCLA--LGKPAD-DATLTAAIEAVGLENAARV 133
           R +++  + Q+P  + +P  T+     E  +   +G P + + T+   ++ VGL+ A R 
Sbjct: 356 RQLQV--VFQDPFGSLSPRMTVEQIIAEGLVTHNIGTPKEREQTVIRVLQEVGLDPATR- 412

Query: 134 LKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQAPG 193
              YP E SGG  QR+ IA A++ E   I+ DEPT+ LD   Q +I+ LL  +  +    
Sbjct: 413 -HRYPHEFSGGQRQRVSIARALVLEPDLILLDEPTSALDRTVQKQIVALLRDLQIRHGLT 471

Query: 194 MLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLV 241
            L ++HD+ VV  LA D+ V+ DGK+VEQG    +F AP+   T+ L+
Sbjct: 472 YLFISHDLAVVHALAHDLIVIKDGKVVEQGPSREIFAAPQQAYTQELL 519