Pairwise Alignments

Query, 314 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 340 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  206 bits (525), Expect = 5e-58
 Identities = 122/316 (38%), Positives = 174/316 (55%), Gaps = 15/316 (4%)

Query: 5   VLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGLDQPL 64
           V+R  +  + +VL  +   F+++    GDPA      S      +MLA  R   GLD+P 
Sbjct: 20  VVRWAVRFVAVVLVIATFNFVLVHAAPGDPAQVMAGQSG-SADEQMLAQLRADYGLDKPY 78

Query: 65  YVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAA 124
            VQ   +L + + LD G S+  QR VL  +   LPATL L  +A +L L   V LG  A 
Sbjct: 79  PVQLAIYLKRIVTLDLGYSYRQQRTVLSLIAERLPATLLLTCSAFLLSLAVGVSLGTLAG 138

Query: 125 RHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYG--GWQ-------- 174
               +  D A+  ++    +MP FWL  +LV+ FSV L WLPA GY   G Q        
Sbjct: 139 VRAGKWSDTALTVVSLFLYAMPVFWLGLMLVLLFSVQLDWLPAFGYVTIGVQMTPFERIR 198

Query: 175 ----HIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNA 230
               H++LP VS+  + LAI ARL+R++++DVA Q  +  AR +GL   Q    H+LRNA
Sbjct: 199 DIAAHLVLPVVSLGAVHLAIYARLMRSAVIDVAHQDFIKTARAKGLKRGQIIIHHMLRNA 258

Query: 231 SLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVV 290
            LP++T  GM  G L+GG ++IE +FAWPG+GR    A+  RDYP++    L+M V+ + 
Sbjct: 259 VLPVVTVAGMQAGTLVGGAVVIETVFAWPGLGRLTFDAVLQRDYPLMLGIFLVMSVIVIS 318

Query: 291 CNLIVDLLNAALDPRI 306
            NLI D +   +DPR+
Sbjct: 319 LNLITDAIYRIVDPRV 334