Pairwise Alignments

Query, 405 a.a., putative transport (VIMSS) from Escherichia coli BW25113

Subject, 405 a.a., MFS transporter from Herbaspirillum seropedicae SmR1

 Score =  295 bits (756), Expect = 1e-84
 Identities = 161/387 (41%), Positives = 227/387 (58%), Gaps = 3/387 (0%)

Query: 4   PVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQY 63
           P+A P   G+ +  ++  I +  F ++LTIGL L VLP ++ D +G +A   G+V+  Q+
Sbjct: 14  PLASP---GVAVFFKLAPITLAVFIAFLTIGLQLPVLPLHLKDALGMNATVVGVVVGAQF 70

Query: 64  FATLLSRPHAGRYADSLGPKKIVVFGLCGCFLSGLGYLTAGLTASLPVISLLLLCLGRVI 123
            A LLSR  AG +AD  G K+ V+ G     LSGL YL +      P  S+ +L LGRV+
Sbjct: 71  AAALLSRAWAGNFADLRGAKRAVMAGFITAALSGLVYLASLALLGRPDWSVAVLLLGRVV 130

Query: 124 LGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQALA 183
           L +G+S   TG+  WG+G+VG  H G+V++W GI  Y A   GAPLGV      G   ++
Sbjct: 131 LALGESLMVTGAMSWGIGLVGPQHGGKVMAWLGIALYAAFGAGAPLGVAINQIYGFAGIS 190

Query: 184 LIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFITL 243
           L  +G++L A+LL  P   +  S  +  PF  VLG VW  G+ LA +S GFGVI  FI L
Sbjct: 191 LASVGLSLAALLLIAPLRAIAPSAHRRTPFYQVLGAVWRPGLGLAFSSVGFGVITAFIAL 250

Query: 244 FYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGVATM 303
            + A+ W  AA A + F  AF+  RLLF +  +++GG  VA++C  +E  G LL+  A  
Sbjct: 251 LFAARAWGNAALAFSAFGAAFILARLLFAHLPDKLGGARVALVCVLIEAAGQLLIWQADA 310

Query: 304 PWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLAGLV 363
              A +G  L G G+SL FP  GV A++  P Q +G A+  Y  F+DLSLG+T PLAG++
Sbjct: 311 AHWAYLGAALTGFGYSLAFPGFGVEAMRRAPPQTRGLAMGAYVAFLDLSLGITSPLAGVL 370

Query: 364 MSWAGVPVIYLAAAGLVAIALLLTWRL 390
            S AGV  IYLA A  V +++L+   L
Sbjct: 371 ASHAGVQSIYLAGAVTVGLSVLVALSL 397