Pairwise Alignments

Query, 292 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 311 a.a., Hsp33 protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  151 bits (382), Expect = 2e-41
 Identities = 106/290 (36%), Positives = 148/290 (51%), Gaps = 20/290 (6%)

Query: 18  RGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNL 77
           RG LV     +   L  HDYP  V  +LAE LV    L + LK+DG  TVQ++G+G +  
Sbjct: 20  RGRLVRAGRAVADTLRPHDYPPAVAALLAETLVLAMGLASGLKYDGVFTVQVRGEGAVRA 79

Query: 78  AVINGNNNQQMRGVARVQGEI----PENADLKTLVGNGYVVITITP-SEGERYQGVVGLE 132
            V +  +   +RGVAR   E     P  A +  L+G G++  T+   +  ERYQG+V LE
Sbjct: 80  LVADVTSGGMVRGVARFDAERLPSGPITAPVLELLGAGHLTFTVDQGANTERYQGIVSLE 139

Query: 133 GDTLAACLEDYFMRSEQLPTRLFIRTG------DVDGKPAAGGMLLQVMPAQNAQQ---- 182
           GD LA C+  YF +SEQLPT L +           D   AA G++LQ MP +  Q     
Sbjct: 140 GDFLADCVASYFDQSEQLPTALKVAVAPPDPALGPDAPWAATGLMLQRMPPEGGQARGEA 199

Query: 183 -DDFDHLAT-LTETIKTEELL--TLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCA 238
            DD    AT L E++   ELL   L    +L R +H E + V   + V F C CSR + A
Sbjct: 200 WDDAWQTATILMESLTPTELLDPALSPETLLHRPFHGEGLEVAPYRPVFFGCRCSRRKVA 259

Query: 239 DALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPAD 288
             L T P EE+ S LA +G ID+ C++C   Y  +  ++  +   A  ++
Sbjct: 260 RTLATFPREELVS-LAHNGTIDVTCEFCKATYALSVQELDALAAEAGESE 308