Pairwise Alignments

Query, 445 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

Subject, 531 a.a., amino acid transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  110 bits (276), Expect = 8e-29
 Identities = 116/469 (24%), Positives = 197/469 (42%), Gaps = 53/469 (11%)

Query: 1   MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQM 60
           M    L+R +G +A++   +G+ +GSG        A  AG     + A+++G  I+    
Sbjct: 1   MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPG--AIWAWILGAAIITTIA 58

Query: 61  CVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLG-FL 119
             YAEL   +PE+G    Y   +    + F++GWA+ W      + + A A V  +  + 
Sbjct: 59  LSYAELGAMFPESGGMVRYSHYSHGSLVGFIAGWAN-WIAIVSVIPVEAEASVQYMASWP 117

Query: 120 TPIDPLL--------------GKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK-IIPF 164
            P    L              G  I+A L++ + LL+  SV+  A   TLIT+ K ++P 
Sbjct: 118 WPWAQSLYVQAPGGAGELSVPGLLISAVLVLVYFLLNFWSVKLFARSNTLITVFKLVVPA 177

Query: 165 TIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATS-----WSYTGMASICYMTG 219
              + L    F +ENF+      I      + L A ++A +     +S+ G  S   + G
Sbjct: 178 ATGVALIASGFHSENFSV----GIHGDAHVIDLAAVLTAVATAGIVFSFNGFQSPVNLAG 233

Query: 220 EIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLAN------------SETPIS 267
           E +NPG+++P A++GS  L  V+Y +L +   G +P + LA             +E  I 
Sbjct: 234 EARNPGRSIPFAVLGSIALATVVYLILQVAYIGAVPPELLAKAGWHGIDFRSPFAELAII 293

Query: 268 DALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKY 327
             L W+  L       + I A +   G+  +      R+ Y M K+       G +HP +
Sbjct: 294 VNLHWLAML-------LYIDAFVSPSGTGITYTATTARMVYGMEKNGTLPAALGKLHPVW 346

Query: 328 NTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRT 387
             P +++    A+   F+F       L     V    + LT G I     R     + R 
Sbjct: 347 GVPRMAMFFNLAVSYLFLFFFRGWGTLAAVISVATIISYLT-GPISAMALRRHAPDMHRP 405

Query: 388 PAFGLMTTLAIASSLILVASTFVWA--PIPGLICAVIVIATGLPAYAFW 434
                +  LA   + ++      WA  P+ G I  ++V+A  LP Y ++
Sbjct: 406 LRIAFLPILA-GVAFVMATELLYWARWPLTGEIILLMVVA--LPVYCYY 451