Pairwise Alignments

Query, 445 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

Subject, 486 a.a., amino acid permease from Burkholderia phytofirmans PsJN

 Score =  132 bits (332), Expect = 2e-35
 Identities = 118/467 (25%), Positives = 206/467 (44%), Gaps = 44/467 (9%)

Query: 6   LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAE 65
           L + LG  ++ A+ +G  +G+GIFV  G  A     P + VL+FV+GG+        Y+E
Sbjct: 27  LSKSLGAISITAMGIGAIIGAGIFVLTGTAAAQFAGPSI-VLSFVLGGIACAFVGLCYSE 85

Query: 66  LSTAYPENGADYVYLKNAGSRPLAFLSGW------ASFWANDAPSLSIMALAIVSNLGFL 119
           L+   P  G+ Y Y         A++ GW      A   A  A   S   ++++ N+G  
Sbjct: 86  LAAMLPVCGSSYTYTYATLGEIFAWIIGWDLILEYAMGAATVAVGWSGYIVSLLHNVGIS 145

Query: 120 TP---------IDPLLGKFIAAGL-----IIAFMLLHLRSVEG---GAAFQTLITIAKII 162
            P         +  L     A G+     I+   +L    V G    A    ++   K++
Sbjct: 146 IPPVLATAPGTVIKLADGTTATGIVNLPAIVIIAILTTMLVLGTKESARLNNIMVAVKLV 205

Query: 163 PFTIVIGLGIFWFKAENFAAPTTTAIGATGSF--MALLAGISATSWSYTGMASICYMTGE 220
                I LG+F+ K  N+        G  G+F    +L G +   +++ G  ++     E
Sbjct: 206 VVVAFIALGVFFIKPANWHPFIPANTGEFGNFGMSGILRGSAVVFFAFIGFDAVSTAAQE 265

Query: 221 IKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISD-----ALTWIPA 275
            K P + MP  ++GS ++  +LY L+A V++GL+P+ +L N   PI+       L W   
Sbjct: 266 AKKPQRDMPIGILGSLIICTILYILVAGVLTGLVPYAEL-NVPDPIAKGVDAIGLNWFSI 324

Query: 276 LGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSII 335
           L    G    +T +I++L      +  Q R+ + M+ D L    F  VHP+  TP +S I
Sbjct: 325 L-IKIGALTGLTTVILVL------LYGQSRIFFTMSTDGLLPPLFARVHPRLQTPYLSQI 377

Query: 336 LQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKPLWRTPAFGLMT 394
           L G++      ++ ++ L    ++   F   L  G++I+ R+ D D    +R P   ++ 
Sbjct: 378 LIGSVVAIVAALTPISVLGEMVSIGTLFAFILVCGAVIYLRRSDSDASRPFRVPGVPVVP 437

Query: 395 TLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQL 441
            L I   L+L+A      P+   +  V+ +  G+  Y  + +   +L
Sbjct: 438 VLGILFCLLLMAG----LPLVTWVRLVVWLVIGMTIYMSYGRNHSRL 480