Pairwise Alignments

Query, 445 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

Subject, 531 a.a., L-aspartate/L-glutamate/L-glutamine:H+ symporter (from data) from Burkholderia phytofirmans PsJN

 Score =  139 bits (351), Expect = 2e-37
 Identities = 123/467 (26%), Positives = 223/467 (47%), Gaps = 59/467 (12%)

Query: 6   LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAE 65
           +QR +G +A++   +G+ +GSG      + AK AG     V A+VIG ++++     YAE
Sbjct: 5   IQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPA--AVCAWVIGAVVILAIALTYAE 62

Query: 66  LSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTP---- 121
           L   +PE+G    Y + +    + F+S WA++ A     +S++ +   +++ +++     
Sbjct: 63  LGAMFPESGGMVRYARYSHGALVGFISAWANWIA----IVSVIPIEAEASIQYMSTWPYP 118

Query: 122 ------IDPLL---GKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK-IIPFTIVIGLG 171
                 +D  L   G  ++A L+I + +L+   V+  A   + ITI K +IP   ++GL 
Sbjct: 119 WAHALFVDGSLTTNGLLLSAALVIIYFMLNYWGVKLFARANSAITIFKFLIPGATILGLM 178

Query: 172 IFWFKAENFAAPTTTAIGATGSFMALLAGISATS--WSYTGMASICYMTGEIKNPGKTMP 229
              F  ENF   +T A      + A+L  +S +   +++ G  S   + GE +NP K++P
Sbjct: 179 FAGFHKENFGEASTFA---PYGWSAVLTAVSTSGIVFAFNGFQSPINLAGEARNPAKSVP 235

Query: 230 RALIGSCLLVLVLYTLLALV-ISGLMPFDKLAN----------SETPISDALTWIPALGS 278
            A+IGS LL LV+Y LL +  I  + P D +            +E  I+  L W+     
Sbjct: 236 FAVIGSILLALVIYVLLQIAYIGAVNPSDVMKGWSHFNFASPFAELAIALNLNWL----- 290

Query: 279 TAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQG 338
              I + + A +   G+ ++ +    R+ YAM ++N   K FG+VHP Y  P  ++    
Sbjct: 291 --AILLYVDAFVSPSGTGTTYMATTSRMIYAMERNNTMPKMFGNVHPFYGVPRQAMWFNL 348

Query: 339 ALGIFFIFV----SDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMT 394
            +   F+F     S L +++   T++      ++  ++   R   D +     P   ++ 
Sbjct: 349 LVSFIFLFFFRGWSSLAAVISVATVISYLTGPISLMAL--RRAATDLERPLHIPGMKIIA 406

Query: 395 TLA-IASSLILVASTFVWA--PIPGLICAVIVIATGLPAYAFWAKRS 438
             A + +SLIL      WA  P+ G I  ++V+A  LP Y ++  +S
Sbjct: 407 PFAFVCASLIL-----YWAKWPLTGEIILLMVVA--LPVYFYFQAKS 446