Pairwise Alignments

Query, 195 a.a., predicted general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

Subject, 259 a.a., general secretion pathway protein J (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.9 bits (115), Expect = 8e-11
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 30/198 (15%)

Query: 5   QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
           Q+GFTL+E++ A+AIF++L + A  +     +  + +Q    +   LQ+    ++ DL Q
Sbjct: 9   QRGFTLIEMLLAIAIFALLGLAANAVLGTVLKNDEVTQDFSNRLRYLQQGFGAIERDLGQ 68

Query: 65  LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWY-----LRNHTLYRAVR 119
           +VAR    T +++  G          D L   SEA +   + W      L   +L     
Sbjct: 69  MVAR----TPRLLEGGRGTTVLQSGSDMLDSESEALSFFRIGWLNPDGKLPRGSLQSVAY 124

Query: 120 TSVDGRKD-------------QPAQAML-EHVESFLLESNSGESQE-------LPLSVTL 158
             + G+ +             QP + +L + V S       G+  E       LP ++ +
Sbjct: 125 VVIAGKLERWYYPYPEPEFGAQPLKTVLFDKVLSVEYAFFVGDKWEKRIEATTLPEAIAM 184

Query: 159 HLQTQQYGGLQRRFALPE 176
            ++ +  G +QR+F LP+
Sbjct: 185 EVELEGIGKIQRKFLLPK 202