Pairwise Alignments

Query, 195 a.a., predicted general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

Subject, 259 a.a., general secretion pathway protein J (RefSeq) from Shewanella loihica PV-4

 Score = 59.7 bits (143), Expect = 4e-14
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 32/217 (14%)

Query: 4   RQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLL 63
           R QGFTLLE++ A+AIF+ML + A  + S   +  + + +  Q+   LQ+    L+ D  
Sbjct: 8   RAQGFTLLEMLIAIAIFAMLGLAANAVLSTVMKNDEVTAEFAQRLKSLQQGFGALERDFG 67

Query: 64  QLVARRNRSTD-----KIMVLGEEAIFTTQSR------------DPLAPLSEAQTLLTV- 105
           Q+VAR  R  +      ++  G++ +F ++S             D L P    Q++  V 
Sbjct: 68  QMVARTPRLLEGGRGSTVIQTGKD-LFDSESEAIVFYRIGWLNPDGLLPRGSLQSVAYVV 126

Query: 106 ------HWYLRNHTLYRAVRTSVDGRKDQPAQAMLEHVESFLLESN---SGESQELPLSV 156
                  WY      Y       +  K    + +L    SF +E       ++  LP ++
Sbjct: 127 QENNLERWYFP----YPEPEFGAEPIKTVVIKNVLSVEYSFYVEDKWQRKFDATSLPKAI 182

Query: 157 TLHLQTQQYGGLQRRFALPEQLAREESPAQTQAGNNN 193
            + ++ +  G +QR+F LP      E+ +    GNNN
Sbjct: 183 AMEIEVEGLGKVQRKFLLPLGAMLSENGSGNNNGNNN 219