Pairwise Alignments

Query, 206 a.a., 30S ribosomal protein S4 (NCBI) from Escherichia coli BW25113

Subject, 208 a.a., ribosomal protein S4 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  205 bits (521), Expect = 5e-58
 Identities = 109/209 (52%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQ---APGQHGARKPRLSDYGVQLRE 57
           MA+Y   K +  RREGT LFLK G R    KC  ++   APGQHG  + ++SDY VQLRE
Sbjct: 1   MAKYTDAKCRQCRREGTKLFLK-GDRCFTDKCAFDRRPYAPGQHGRARKKVSDYAVQLRE 59

Query: 58  KQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQL 117
           KQKVRR+YG+LE+QF  Y+ +A   KG TG NLL+LLE RLDNV+YR+GF  +R +ARQL
Sbjct: 60  KQKVRRMYGILEQQFHAYFTKADMAKGVTGANLLSLLERRLDNVIYRLGFANSRNQARQL 119

Query: 118 VSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGK 177
           V H    +NGR VNI S QV   D + + EK++K   +  A E+  +R  P WLE D   
Sbjct: 120 VRHGIFTLNGRKVNIPSLQVRIGDTIEVPEKSRKIPVLAEAQEVIARRGCPAWLEADGAN 179

Query: 178 MEGTFKRKPERSDLSADINEHLIVELYSK 206
             G  K  P+R D+   INEHLIVELYSK
Sbjct: 180 FRGVVKALPQREDIQFPINEHLIVELYSK 208